RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RAB39AQ14964 217 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 RP9Q8TA86 221 aaKnown RBP12.77□□□□□ -0.36
TSKU-203ENST00000527881 JOSD2Q8TAC2 188 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 ZNF516Q92618 1163 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 FRMD8P1Q9BZ68 369 aaPredicted RBP12.77□□□□□ -0.36
TSKU-203ENST00000527881 GBA3Q9H227 469 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 XPNPEP3Q9NQH7 507 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 EMCNQ9ULC0 261 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 ERGIC3Q9Y282 383 aa12.77□□□□□ -0.36
TSKU-203ENST00000527881 DDX60LQ5H9U9 1706 aaKnown RBP12.77□□□□□ -0.37
TSKU-203ENST00000527881 LAMB2P55268 1798 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 HMX2A2RU54 273 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 ZNF839A8K0R7 811 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 RBL1P28749 1068 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 YAP1P46937 504 aaKnown RBP12.77□□□□□ -0.37
TSKU-203ENST00000527881 MAPK11Q15759 364 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 PGS1Q32NB8 556 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 TDRD10Q5VZ19 366 aaKnown RBP12.77□□□□□ -0.37
TSKU-203ENST00000527881 C14orf80Q86SX3 495 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
TSKU-203ENST00000527881 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 C1orf50Q9BV19 199 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 DHX35Q9H5Z1 703 aaKnown RBP12.77□□□□□ -0.37
TSKU-203ENST00000527881 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.77□□□□□ -0.37
TSKU-203ENST00000527881 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
TSKU-203ENST00000527881 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 MAFGO15525 162 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 MAPTP10636 758 aaKnown RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 MPSTP25325 297 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 TPTEP56180 551 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 MFSD14AQ96MC6 490 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ILKAPQ9H0C8 392 aaPredicted RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CYP26B1Q9NR63 512 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 MKS1Q9NXB0 559 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 NCKIPSDQ9NZQ3 722 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CCPG1Q9ULG6 757 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 NOX1Q9Y5S8 564 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 LSM12Q3MHD2 195 aaKnown RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 SEL1L3Q68CR1 1132 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ANKRD26P1Q6NSI1 321 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 KCTD8Q6ZWB6 473 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 IGFN1Q86VF2 1251 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 BPIFB6Q8NFQ5 453 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 PBXIP1Q96AQ6 731 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 UPF3AQ9H1J1 476 aaKnown RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 PARVBQ9HBI1 364 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ZNF229Q9UJW7 825 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 POU2F3Q9UKI9 436 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 DGKBQ9Y6T7 804 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 NHSL1Q5SYE7 1610 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ADAMTSL3P82987 1691 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 TRIM38O00635 465 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CLOCKO15516 846 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 PTPN7P35236 360 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ABCG1P45844 678 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 SP4Q02446 784 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 BCL2A1Q16548 175 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 SCARA3Q6AZY7 606 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 EPGNQ6UW88 154 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 ATG14Q6ZNE5 492 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CAND1Q86VP6 1230 aaKnown RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 TMEM161BQ8NDZ6 487 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 CEP44Q9C0F1 390 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 APOBEC3GQ9HC16 384 aaKnown RBP12.76□□□□□ -0.37
TSKU-203ENST00000527881 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
TSKU-203ENST00000527881 WDR27A2RRH5 827 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 FAM149AA5PLN7 773 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 G3V3G9 751 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 ALDOAP04075 364 aaKnown RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 ADORA2AP29274 412 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 ADAM17P78536 824 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 TAP1Q03518 808 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SF3B4Q15427 424 aaKnown RBP eCLIP12.75□□□□□ -0.37
TSKU-203ENST00000527881 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 HACE1Q8IYU2 909 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 LPGAT1Q92604 370 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 CNDP1Q96KN2 507 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 APBA2Q99767 749 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
TSKU-203ENST00000527881 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 PSMD11O00231 422 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 GRIA1P42261 906 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 DPP6P42658 865 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 BCAR1P56945 870 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 DNASE1L3Q13609 305 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 SNX29P2Q8IUI4 249 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 PDZD8Q8NEN9 1154 aa12.75□□□□□ -0.37
TSKU-203ENST00000527881 MRPL46Q9H2W6 279 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms