RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-219	ENST00000527498	GAST	P01350	101 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	RB1	P06400	928 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ITGA5	P08648	1049 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	GNAI3	P08754	354 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	AR	P10275	920 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ZFX	P17010	805 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SP100	P23497	879 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CNTF	P26441	200 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ADSL	P30566	484 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	PIK3CG	P48736	1102 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	OAZ1	P54368	228 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SOX8	P57073	446 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	RPS16	P62249	146 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	PFKP	Q01813	784 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CREM	Q03060	361 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.05	□□□□□ -1.76	9e-8	■■■□□ 17.8
PUM1-219	ENST00000527498	MAPK7	Q13164	816 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SLC13A2	Q13183	592 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CAMK1	Q14012	370 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ANGPT1	Q15389	498 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TAF11	Q15544	211 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TIGD6	Q17RP2	521 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	BOLA3	Q53S33	107 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	C3orf38	Q5JPI3	329 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ZNF618	Q5T7W0	954 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	BORA	Q6PGQ7	559 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	KCNV1	Q6PIU1	500 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	KLHL17	Q6TDP4	642 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TEPP	Q6URK8	271 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	PACS1	Q6VY07	963 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	PRR23C	Q6ZRP0	262 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ZC3H18	Q86VM9	953 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	KRT73	Q86Y46	540 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ERC1	Q8IUD2	1116 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	C10orf67	Q8IYJ2	551 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	UNC5B	Q8IZJ1	945 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ADGRG2	Q8IZP9	1017 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	DCLK2	Q8N568	766 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	DBF4B	Q8NFT6	615 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	FBXO18	Q8NFZ0	1043 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	OR7D4	Q8NG98	312 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CCHCR1	Q8TD31	782 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ZNF480	Q8WV37	535 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ASB12	Q8WXK4	309 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CENPI	Q92674	756 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	PPP1R14B	Q96C90	147 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TSPAN17	Q96FV3	270 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	MAEL	Q96JY0	434 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CCDC17	Q96LX7	622 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	MEIS3	Q99687	375 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SLC39A3	Q9BRY0	314 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TCHP	Q9BT92	498 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	KATNAL1	Q9BW62	490 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	PANK2	Q9BZ23	570 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	MRPL46	Q9H2W6	279 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ADAMTS10	Q9H324	1103 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SMOC2	Q9H3U7	446 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	CARS2	Q9HA77	564 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SEPSECS	Q9HD40	501 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	BATF3	Q9NR55	127 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	LANCL2	Q9NS86	450 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	OLA1	Q9NTK5	396 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	RNF146	Q9NTX7	359 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	NSMCE4A	Q9NXX6	385 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	RGL1	Q9NZL6	768 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SLAMF8	Q9P0V8	285 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SAE1	Q9UBE0	346 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	HDAC6	Q9UBN7	1215 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	ZNF212	Q9UDV6	495 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	FBXO10	Q9UK96	956 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SIT1	Q9Y3P8	196 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	N6AMT1	Q9Y5N5	214 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	FPGT-TNNI3K	V9GXZ4	949 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	TTC3	P53804	2025 aa		4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	SETX	Q7Z333	2677 aa	Known RBP	4.05	□□□□□ -1.76
PUM1-219	ENST00000527498	RALGAPA1	Q6GYQ0	2036 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	LOC100996750	A0A140TA64	210 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498		A0A1W2PRQ8	180 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	MBD3L3	A6NE82	208 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-219	ENST00000527498		F5H6K3	240 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	KIF2A	O00139	706 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	DAPK3	O43293	454 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	TMEM127	O75204	238 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	TBCA	O75347	108 aa	Known RBP	4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	GPR32	O75388	356 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	LY86	O95711	162 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	LRG1	P02750	347 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	MMP1	P03956	469 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	POLB	P06746	335 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	DBH	P09172	617 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	LINC00271	P0C7V0	271 aa		4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	MYCL	P12524	364 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM1-219	ENST00000527498	CKMT1A	P12532	417 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms