RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 WNT9AO14904 365 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 RFPL3O75679 317 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 FBXO21O94952 628 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 MOCS3O95396 460 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 PRCPP42785 496 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 ARRB1P49407 418 aaPredicted RBP16.68■□□□□ 0.26
PTPRU-210ENST00000527027 ECT2LQ008S8 904 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 DNAJC3Q13217 504 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 CDH18Q13634 790 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 STILQ15468 1287 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 MS4A13Q5J8X5 152 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 C6orf118Q5T5N4 469 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 MMS22LQ6ZRQ5 1243 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 SND1Q7KZF4 910 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPRU-210ENST00000527027 EID2Q8N6I1 236 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 SLC35C1Q96A29 364 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 FCRL2Q96LA5 508 aaPredicted RBP16.68■□□□□ 0.26
PTPRU-210ENST00000527027 SERPINB11Q96P15 392 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 TSG101Q99816 390 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 ZSWIM1Q9BR11 485 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 GOLPH3LQ9H4A5 285 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 ARMCX3Q9UH62 379 aaPredicted RBP16.68■□□□□ 0.26
PTPRU-210ENST00000527027 SLCO3A1Q9UIG8 710 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 TPX2Q9ULW0 747 aaKnown RBP16.68■□□□□ 0.26
PTPRU-210ENST00000527027 TLR6Q9Y2C9 796 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 PCDHB4Q9Y5E5 795 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 M0QYV0 167 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 RNF225M0QZC1 329 aaPredicted RBP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 TLR4O00206 839 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 FYNP06241 537 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 GOT1P17174 413 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 CTSOP43234 321 aaPredicted RBP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 CLDN6P56747 220 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 TARDBPQ13148 414 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 NNTQ13423 1086 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 DCAF6Q58WW2 860 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 SLC45A4Q5BKX6 768 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 CFAP52Q8N1V2 620 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 AADATQ8N5Z0 425 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 OR14C36Q8NHC7 312 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 PIP4K2CQ8TBX8 421 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 DQX1Q8TE96 717 aaKnown RBP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 SLC39A13Q96H72 371 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 SERAC1Q96JX3 654 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 UBL7Q96S82 380 aaPredicted RBP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 SCAND2PQ9GZW5 306 aaPredicted RBP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 MIS12Q9H081 205 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
PTPRU-210ENST00000527027 ERVMER34-1Q9H9K5 563 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 RMND1Q9NWS8 449 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 CEP83Q9Y592 693 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 ITIH6Q6UXX5 1313 aa16.67■□□□□ 0.26
PTPRU-210ENST00000527027 FLNBO75369 2602 aaKnown RBP16.66■□□□□ 0.26
PTPRU-210ENST00000527027 LUC7L3O95232 432 aaKnown RBP16.66■□□□□ 0.26
PTPRU-210ENST00000527027 ADH1BP00325 375 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 C5AR1P21730 350 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 EPHA8P29322 1005 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-210ENST00000527027 EIF2S3P41091 472 aaKnown RBP16.66■□□□□ 0.26
PTPRU-210ENST00000527027 RXRGP48443 463 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 PSMD8P48556 350 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 ACADVLP49748 655 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 NXPH1P58417 271 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 BNIP3Q12983 259 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 COBLL1Q53SF7 1204 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 RNF219Q5W0B1 726 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-210ENST00000527027 STK40Q8N2I9 435 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 TSC1Q92574 1164 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 AK5Q9Y6K8 562 aa16.66■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3DA0A087WVF3 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3IA0A087WXS9 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3EA0A087X179 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3KA0A087X1G2 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3FA6NER0 549 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3LB9A6J9 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3HP0C7X1 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
PTPRU-210ENST00000527027 ITPKBP27987 946 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 FMO5P49326 533 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
PTPRU-210ENST00000527027 ADPRHP54922 357 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 SEMG2Q02383 582 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 PNOCQ13519 176 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 ZNF658Q5TYW1 1059 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3GQ6DHY5 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3CQ6IPX1 549 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 FBXL19Q6PCT2 694 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 LRRC69Q6ZNQ3 347 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 TBC1D3Q8IZP1 549 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-210ENST00000527027 APCDD1Q8J025 514 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 OXR1Q8N573 874 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 PTPRN2Q92932 1015 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 RPL10LQ96L21 214 aaKnown RBP16.65■□□□□ 0.26
PTPRU-210ENST00000527027 NT5C1BQ96P26 610 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 NRSN2Q9GZP1 204 aa16.65■□□□□ 0.26
PTPRU-210ENST00000527027 METTL14Q9HCE5 456 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms