RNA–Protein interactions for RNA: ENST00000526995.5

TRAF6-202, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 4,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-202ENST00000526995 SIKE1Q9BRV8 207 aa13.72□□□□□ -0.21
TRAF6-202ENST00000526995 FAM124BQ9H5Z6 455 aaPredicted RBP13.72□□□□□ -0.21
TRAF6-202ENST00000526995 PCDHA2Q9Y5H9 948 aa13.72□□□□□ -0.21
TRAF6-202ENST00000526995 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
TRAF6-202ENST00000526995 CKBP12277 381 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 ZNF7P17097 686 aaPredicted RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 MZF1P28698 734 aaPredicted RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 SERPINH1P50454 418 aaKnown RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 DDX39BQ13838 428 aaKnown RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 STRADAQ7RTN6 431 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 ZNF555Q8NEP9 628 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 FAM162AQ96A26 154 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 CEP19Q96LK0 163 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 NMRAL1Q9HBL8 299 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 SHBGP04278 402 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 KCNA4P22459 653 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 RCN1Q15293 331 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 PCID2Q5JVF3 399 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 C1orf127Q8N9H9 656 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 DCLRE1BQ9H816 532 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 SPASTQ9UBP0 616 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 VTI1BQ9UEU0 232 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 RNASEH1O60930 286 aaKnown RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 GOT1P17174 413 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 HECTD3Q5T447 861 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 SPRYD7Q5W111 196 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 CNDP1Q96KN2 507 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 CPXM1Q96SM3 734 aa13.71□□□□□ -0.21
TRAF6-202ENST00000526995 THUMPD3Q9BV44 507 aaKnown RBP13.71□□□□□ -0.21
TRAF6-202ENST00000526995 GPR25O00155 361 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 DDX3YO15523 660 aaKnown RBP13.71□□□□□ -0.22
TRAF6-202ENST00000526995 XRCC4Q13426 336 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 SLC35G1Q2M3R5 365 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 TEKT4Q8WW24 435 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 SPATA17Q96L03 361 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 UTP6Q9NYH9 597 aaKnown RBP13.71□□□□□ -0.22
TRAF6-202ENST00000526995 TCHHQ07283 1943 aa13.71□□□□□ -0.22
TRAF6-202ENST00000526995 C16orf96A6NNT2 1141 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 FCHO1O14526 889 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 IGSF6O95976 241 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 CYP1A1P04798 512 aaPredicted RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 TFE3P19532 575 aaPredicted RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 MAPK1P28482 360 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 AIF1P55008 147 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 LRRC74AQ0VAA2 488 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 PHF21BQ96EK2 531 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 MAML3Q96JK9 1138 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 SENP6Q9GZR1 1112 aaPredicted RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 BLOC1S6Q9UL45 172 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 UBDO15205 165 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 PEX10O60683 326 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 SEC24DO94855 1032 aaPredicted RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 SOX11P35716 441 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 GLT6D1Q7Z4J2 308 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 CEP70Q8NHQ1 597 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 PCDH18Q9HCL0 1135 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 TUBGCP4Q9UGJ1 667 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 COQ4Q9Y3A0 265 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 FZD9O00144 591 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ATP5BP06576 529 aaKnown RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 BTKQ06187 659 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 SLC25A52Q3SY17 297 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 MON1BQ7L1V2 547 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ACSS3Q9H6R3 686 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 DUOX1Q9NRD9 1551 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 CLDN5O00501 218 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 TSPAN1O60635 241 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 DUSP11O75319 330 aaKnown RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ERVK-10P10266 1014 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 NFKB1P19838 968 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 SPIRE1Q08AE8 756 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ANKS6Q68DC2 871 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 LLGL2Q6P1M3 1020 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 FBXO39Q8N4B4 442 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
TRAF6-202ENST00000526995 CERS2Q96G23 380 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ZYG11BQ9C0D3 744 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
TRAF6-202ENST00000526995 ALOX15BO15296 676 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 CSH1P0DML2 217 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 CSH2P0DML3 217 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 CCNB1P14635 433 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 ACADSP16219 412 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 KCNA3P22001 575 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 FECHP22830 423 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 CHKAP35790 457 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 BCL2L1Q07817 233 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 RAP1GAP2Q684P5 730 aa13.69□□□□□ -0.22
TRAF6-202ENST00000526995 TMPRSS6Q8IU80 811 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms