RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PSTKQ8IV42 348 aaKnown RBP11.95□□□□□ -0.5
LINC01001-201ENST00000526704 PLD6Q8N2A8 252 aaKnown RBP11.95□□□□□ -0.5
LINC01001-201ENST00000526704 DCLK2Q8N568 766 aa11.95□□□□□ -0.5
LINC01001-201ENST00000526704 PYDC1Q8WXC3 89 aa11.95□□□□□ -0.5
LINC01001-201ENST00000526704 RBBP8Q99708 897 aa11.95□□□□□ -0.5
LINC01001-201ENST00000526704 SHCBP1LQ9BZQ2 653 aa11.95□□□□□ -0.5
LINC01001-201ENST00000526704 ADAMTS10Q9H324 1103 aa11.95□□□□□ -0.5
LINC01001-201ENST00000526704 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
LINC01001-201ENST00000526704 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PIRO00625 290 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PDE5AO76074 875 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 LYNP07948 512 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 GNAT1P11488 350 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 MYL4P12829 197 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 ITGAXP20702 1163 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 GARSP41250 739 aaKnown RBP11.94□□□□□ -0.5
LINC01001-201ENST00000526704 DEUP1Q05D60 604 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PPIL2Q13356 520 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PEX6Q13608 980 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PAFAH1B3Q15102 231 aaKnown RBP11.94□□□□□ -0.5
LINC01001-201ENST00000526704 GRTP1Q5TC63 336 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 THEMIS2Q5TEJ8 643 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 DHDDSQ86SQ9 333 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CCNYQ8ND76 341 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 OR52K1Q8NGK4 314 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 ACTRT2Q8TDY3 377 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 FAM149B1Q96BN6 582 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 TRAPPC9Q96Q05 1148 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 VTA1Q9NP79 307 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 ETAA1Q9NY74 926 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CDH22Q9UJ99 828 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 GINS2Q9Y248 185 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PCNTO95613 3336 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 RBM47A0AV96 593 aaKnown RBP11.94□□□□□ -0.5
LINC01001-201ENST00000526704 XPO1O14980 1071 aaKnown RBP11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CREB3O43889 395 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CPA3P15088 417 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 MX2P20592 715 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 GTF2A2P52657 109 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 EPHB1P54762 984 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 IFRD2Q12894 506 aaPredicted RBP11.94□□□□□ -0.5
LINC01001-201ENST00000526704 ZNF792Q3KQV3 632 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CCDC153Q494R4 210 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 DCAF6Q58WW2 860 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 NAPRTQ6XQN6 538 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PIGZQ86VD9 579 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 TNS4Q8IZW8 715 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 NT5C3BQ969T7 300 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 ATXN7L3BQ96GX2 97 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 SNX25Q9H3E2 840 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 CDHR5Q9HBB8 845 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 TXNDC16Q9P2K2 825 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 PCDHB12Q9Y5F1 795 aa11.94□□□□□ -0.5
LINC01001-201ENST00000526704 KPNA7A9QM74 516 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 DCLK1O15075 740 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 AKAP5P24588 427 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 SERPINB8P50452 374 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 LIMK2P53671 638 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 HNRNPDQ14103 355 aaKnown RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 RBBP5Q15291 538 aaKnown RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 FRMD7Q6ZUT3 714 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 LIMS2Q7Z4I7 341 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 PDSS2Q86YH6 399 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 ANKRD13AQ8IZ07 590 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 NME8Q8N427 588 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 ZNF781Q8N8C0 355 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 AZIN2Q96A70 460 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 ZNF669Q96BR6 464 aaPredicted RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 TUBGCP5Q96RT8 1024 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 NPY6RQ99463 290 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 DDX50Q9BQ39 737 aaKnown RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 EBF3Q9H4W6 596 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 CYP4F11Q9HBI6 524 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 PDP2Q9P2J9 529 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 G3V2L1 256 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 KCNK1O00180 336 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 ZBTB14O43829 449 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 USP12O75317 370 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 NCF2P19878 526 aaPredicted RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 PTPN3P26045 913 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 IRF9Q00978 393 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 USP4Q13107 963 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 NOTUMQ6P988 496 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 SLC30A9Q6PML9 568 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 STRA8Q7Z7C7 330 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 CLEC14AQ86T13 490 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 OSTM1Q86WC4 334 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 DCPSQ96C86 337 aaKnown RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 CCDC124Q96CT7 223 aaKnown RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 AGAP2Q99490 1192 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms