RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 ACOT2P49753 483 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 SEPHS1P49903 392 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 LSM3P62310 102 aaKnown RBP12.6□□□□□ -0.39
FGFR1-227ENST00000526570 PAGE2BQ5JRK9 111 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 IER5Q5VY09 327 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 AKAP1Q92667 903 aaKnown RBP eCLIP12.6□□□□□ -0.39
FGFR1-227ENST00000526570 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 RIT2Q99578 217 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 ZSWIM1Q9BR11 485 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 BFARQ9NZS9 450 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 GPN3Q9UHW5 284 aaPredicted RBP12.6□□□□□ -0.39
FGFR1-227ENST00000526570 TMEM5Q9Y2B1 443 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 DHFRP00374 187 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 RPL21P46778 160 aaKnown RBP12.6□□□□□ -0.39
FGFR1-227ENST00000526570 NFYCQ13952 458 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 DACT2Q5SW24 774 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 EFCAB12Q6NXP0 572 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 RNF135Q8IUD6 432 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 MCFD2Q8NI22 146 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 CAB39LQ9H9S4 337 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 ERAP1Q9NZ08 941 aa12.6□□□□□ -0.39
FGFR1-227ENST00000526570 MAGEB2O15479 319 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 TLR2O60603 784 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PROCP04070 461 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 CYP2C9P11712 490 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 ZNF24P17028 368 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 FGFR3P22607 806 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 CDC42EP1Q00587 391 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 FAM205AQ6ZU69 1335 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 DENND2DQ9H6A0 471 aaPredicted RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 CYTH4Q9UIA0 394 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MRPS7Q9Y2R9 242 aaKnown RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 LOC110117498-PIK3R3F6TDL0 507 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PDXKO00764 312 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 TPPPO94811 219 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MYBP10242 640 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MAGP20916 626 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 FIGNQ5HY92 759 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PPM1LQ5SGD2 360 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 TYW3Q6IPR3 259 aaKnown RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PAGE2Q7Z2X7 111 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 DHFR2Q86XF0 187 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 CACTIN-AS1Q8N1I8 211 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PIDD1Q9HB75 910 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 ILVBLA1L0T0 632 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 E9PBE3 544 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 YES1P07947 543 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 TGFBR2P37173 567 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MMP13P45452 471 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 AUHQ13825 339 aaKnown RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 ZNF267Q14586 743 aaPredicted RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 NIPAL1Q6NVV3 410 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MZT2AQ6P582 158 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 GPRASP2Q96D09 838 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 AGAP1Q9UPQ3 857 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MYMKA6NI61 221 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 HK2P52789 917 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 MAZP56270 477 aaKnown RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 CCNIQ14094 377 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 FAM83AQ86UY5 434 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 ULK2Q8IYT8 1036 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PAFAH2Q99487 392 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 KLHL8Q9P2G9 620 aaPredicted RBP12.59□□□□□ -0.39
FGFR1-227ENST00000526570 FZD1Q9UP38 647 aa12.59□□□□□ -0.39
FGFR1-227ENST00000526570 PPM1BO75688 479 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 HOXD12P35452 270 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 AP3M2P53677 418 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 MTM1Q13496 603 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 SMYD1Q8NB12 490 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.39
FGFR1-227ENST00000526570 C7orf25Q9BPX7 421 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 VPS45Q9NRW7 570 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 SLC24A2Q9UI40 661 aa12.58□□□□□ -0.39
FGFR1-227ENST00000526570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.58□□□□□ -0.39
FGFR1-227ENST00000526570 E2F8A0AVK6 867 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 MSH4O15457 936 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 IFNA7P01567 189 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 THEGLP0DJG4 465 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 HOXA10P31260 410 aaPredicted RBP12.58□□□□□ -0.4
FGFR1-227ENST00000526570 PTPAQ15257 358 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 SNAP47Q5SQN1 464 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 LIN54Q6MZP7 749 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 RCOR2Q8IZ40 523 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 BHLHE22Q8NFJ8 381 aaPredicted RBP12.58□□□□□ -0.4
FGFR1-227ENST00000526570 TSEN34Q9BSV6 310 aaKnown RBP12.58□□□□□ -0.4
FGFR1-227ENST00000526570 RUVBL2Q9Y230 463 aaKnown RBP12.58□□□□□ -0.4
FGFR1-227ENST00000526570 ISPDA4D126 451 aa12.58□□□□□ -0.4
FGFR1-227ENST00000526570 SLC37A4O43826 429 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms