RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 SEPT14Q6ZU15 432 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 RFX8Q6ZV50 586 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 PARS2Q7L3T8 475 aaKnown RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 MCM10Q7L590 875 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 P3H2Q8IVL5 708 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 TRIML1Q8N9V2 468 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 GABPB2Q8TAK5 448 aaPredicted RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 KIAA1524Q8TCG1 905 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 GIMAP1Q8WWP7 306 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 TAF4BQ92750 862 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 KIAA1191Q96A73 305 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 R3HDM4Q96D70 268 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 ZBTB10Q96DT7 871 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 FAM227BQ96M60 508 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 NUDT16L1Q9BRJ7 211 aaKnown RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 C17orf80Q9BSJ5 609 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 TEX13AQ9BXU3 409 aaPredicted RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 GBA2Q9HCG7 927 aaPredicted RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 MED4Q9NPJ6 270 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 HOXC10Q9NYD6 342 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 C9orf78Q9NZ63 289 aaPredicted RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 STK26Q9P289 416 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 DKK4Q9UBT3 224 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 CLIP2Q9UDT6 1046 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 ZMAT5Q9UDW3 170 aaKnown RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 SLC39A10Q9ULF5 831 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 NFU1Q9UMS0 254 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 ITM2BQ9Y287 266 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 DRG1Q9Y295 367 aaKnown RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 SSX2IPQ9Y2D8 614 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 TRIM17Q9Y577 477 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 MAGED1Q9Y5V3 778 aaPredicted RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 SNX14Q9Y5W7 946 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 LRRFIP2Q9Y608 721 aaKnown RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 DDX49Q9Y6V7 483 aaKnown RBP3.44□□□□□ -1.86
COPB1-205ENST00000526527 UACAQ9BZF9 1416 aa3.44□□□□□ -1.86
COPB1-205ENST00000526527 ABCA8O94911 1581 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 FAM234BA2RU67 622 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 A8MVJ9 347 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 SMIM22K7EJ46 135 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 NCK2O43639 380 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TMEM225BP0DP42 221 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 SNHG28P0DPA3 235 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 MYCLP12524 364 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 TNFAIP3P21580 790 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 MST1P26927 711 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 HOXC13P31276 330 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CCKARP32238 428 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 HSPA1LP34931 641 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 ADD2P35612 726 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 KRT20P35900 424 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 GNL1P36915 607 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 UBA7P41226 1012 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 ALDH18A1P54886 795 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 TIRAPP58753 221 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TMF1P82094 1093 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 AKAP17AQ02040 695 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 IKQ13123 557 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 PRKG2Q13237 762 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CBFBQ13951 182 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TAF7Q15545 349 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 MAPKAPK3Q16644 382 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 MPEG1Q2M385 716 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CCDC122Q5T0U0 273 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 FAM83BQ5T0W9 1011 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CFAP58Q5T655 872 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 PRAMEF17Q5VTA0 474 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 FAAH2Q6GMR7 532 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 ERAP2Q6P179 960 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TLDC1Q6P9B6 456 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TMCO3Q6UWJ1 677 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 DLK2Q6UY11 383 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 C4orf50Q6ZRC1 276 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 MAVSQ7Z434 540 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 RASGRP3Q8IV61 690 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CCDC28AQ8IWP9 274 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CCDC65Q8IXS2 484 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CLASRPQ8N2M8 674 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 BRSK1Q8TDC3 778 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 WDR60Q8WVS4 1066 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CINPQ9BW66 212 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 PCDHAC1Q9H158 963 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CHST12Q9NRB3 414 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 SEPT11Q9NVA2 429 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 ARGLU1Q9NWB6 273 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 IRAK4Q9NWZ3 460 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TRMT1Q9NXH9 659 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 ELOVL5Q9NYP7 299 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 WWOXQ9NZC7 414 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 RGL1Q9NZL6 768 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 TBK1Q9UHD2 729 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 GTF3C4Q9UKN8 822 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 AMFRQ9UKV5 643 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 MRPL11Q9Y3B7 192 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 ANGPTL3Q9Y5C1 460 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 MORC2Q9Y6X9 1032 aaPredicted RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 ZCCHC11Q5TAX3 1644 aaKnown RBP3.43□□□□□ -1.86
COPB1-205ENST00000526527 EFCAB5A4FU69 1503 aa3.43□□□□□ -1.86
COPB1-205ENST00000526527 CLIP1P30622 1438 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms