RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SEMA3BQ13214 749 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF177Q13360 481 aaPredicted RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 CDH18Q13634 790 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 MESDQ14696 234 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 BOLA3Q53S33 107 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 EMC10Q5UCC4 262 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 TMEM215Q68D42 235 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 DTWD2Q8NBA8 298 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 WFIKKN2Q8TEU8 576 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 SNRNP25Q9BV90 132 aaKnown RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 ZYG11BQ9C0D3 744 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 RETREG1Q9H6L5 497 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 MPP6Q9NZW5 540 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 KIAA1522Q9P206 1035 aaPredicted RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF212Q9UDV6 495 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 GGA2Q9UJY4 613 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 HCN2Q9UL51 889 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 AP4E1Q9UPM8 1137 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 NEU3Q9UQ49 428 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 TBC1D30Q9Y2I9 924 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 HCN4Q9Y3Q4 1203 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 CACNA1IQ9P0X4 2223 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 BTNL10A8MVZ5 291 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 CHURC1-FNTBB4DL54 471 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 PJA2O43164 708 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 ARHGAP6O43182 974 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 HOXC13P31276 330 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 NOP2P46087 812 aaKnown RBP13.31□□□□□ -0.28
SMPD1-202ENST00000526280 NUBP1P53384 320 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 OXCT1P55809 520 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
SMPD1-202ENST00000526280 MTAPQ13126 283 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 CA9Q16790 459 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 C2orf27AQ580R0 203 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 CXorf57Q6NSI4 855 aaKnown RBP13.31□□□□□ -0.28
SMPD1-202ENST00000526280 PKN3Q6P5Z2 889 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 ADIPOR2Q86V24 386 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 CPNE8Q86YQ8 564 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 AHI1Q8N157 1196 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 SPEM1Q8N4L4 309 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 RPLP0P6Q8NHW5 317 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 TBC1D31Q96DN5 1066 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 DESI2Q9BSY9 194 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 LACRTQ9GZZ8 138 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 DHX35Q9H5Z1 703 aaKnown RBP13.31□□□□□ -0.28
SMPD1-202ENST00000526280 ELOVL2Q9NXB9 296 aa13.31□□□□□ -0.28
SMPD1-202ENST00000526280 KMT2EQ8IZD2 1858 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 TMEM110-MUSTN1A8MSY1 372 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 CREB3O43889 395 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 ATG13O75143 517 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 RARAP10276 462 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 RHOQP17081 205 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 HTR7P34969 479 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 TIE1P35590 1138 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 PLK1P53350 603 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 CCZ1BP86790 482 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 CCZ1P86791 482 aaPredicted RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 SLC12A1Q13621 1099 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 DMC1Q14565 340 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 EIF4HQ15056 248 aaKnown RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 HADHQ16836 314 aaKnown RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 FUT11Q495W5 492 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 HSF5Q4G112 596 aaPredicted RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 KCNT1Q5JUK3 1230 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 TXNRD3NBQ6F5E7 133 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 RWDD4Q6NW29 188 aaKnown RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 TFAP2DQ7Z6R9 452 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 KIAA1328Q86T90 577 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 SETD3Q86TU7 594 aaPredicted RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 NLRP14Q86W24 1093 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF513Q8N8E2 541 aaPredicted RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 IL17RCQ8NAC3 791 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 OR52K2Q8NGK3 314 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 TTC17Q96AE7 1141 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF830Q96NB3 372 aaPredicted RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 KCTD15Q96SI1 283 aaPredicted RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 EPAS1Q99814 870 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 FEM1AQ9BSK4 669 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 ZWILCHQ9H900 591 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 INTS6Q9UL03 887 aaKnown RBP13.3□□□□□ -0.28
SMPD1-202ENST00000526280 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 DUSP10Q9Y6W6 482 aa13.3□□□□□ -0.28
SMPD1-202ENST00000526280 NPC1O15118 1278 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 BUB1BO60566 1050 aaPredicted RBP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 MZF1P28698 734 aaPredicted RBP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 EPHB2P29323 1055 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 OR1E1P30953 314 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 CSKP41240 450 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 SLC1A1P43005 524 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 SSR1P43307 286 aaKnown RBP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF135P52742 658 aaPredicted RBP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 TAS2R40P59535 323 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 E2F5Q15329 346 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms