RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 PRICKLE1Q96MT3 831 aaPredicted RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 SLC6A18Q96N87 628 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 SERPINB11Q96P15 392 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 NT5C1BQ96P26 610 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 ELF4Q99607 663 aaPredicted RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 ZSWIM1Q9BR11 485 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 MIS12Q9H081 205 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 NEUROG2Q9H2A3 272 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 EBF2Q9HAK2 575 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 SERGEFQ9UGK8 458 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 TPX2Q9ULW0 747 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 ERVW-1Q9UQF0 538 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 PCDHGA1Q9Y5H4 931 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 IGSF10Q6WRI0 2623 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 DOCK9Q9BZ29 2069 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 A0A087WV48 116 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 EDDM13A0A1B0GTR0 161 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 YKT6O15498 198 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 SART1O43290 800 aaKnown RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 LUC7L3O95232 432 aaKnown RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 SMC2O95347 1197 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 ITGAVP06756 1048 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 C1SP09871 688 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 ABCB4P21439 1286 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 BRD2P25440 801 aaKnown RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 CCR5P51681 352 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 ECT2LQ008S8 904 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 KCNJ12Q14500 433 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 FSCBQ5H9T9 825 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 PITRM1Q5JRX3 1037 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 PRAMEF14Q5SWL7 426 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 RNF219Q5W0B1 726 aaPredicted RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 SND1Q7KZF4 910 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 GATAD2AQ86YP4 633 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 FMR1NBQ8N0W7 255 aaPredicted RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 CFAP52Q8N1V2 620 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 DQX1Q8TE96 717 aaKnown RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 FAM129BQ96TA1 746 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
VPS26B-203ENST00000525918 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 AASDHPPTQ9NRN7 309 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 NAALADL1Q9UQQ1 740 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 CEP83Q9Y592 693 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 KNTC1P50748 2209 aa11.06□□□□□ -0.64
VPS26B-203ENST00000525918 TTC34A8MYJ7 566 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 C10orf142B7Z368 130 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 ENC1O14682 589 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 CAPN9O14815 690 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 P4HA2O15460 535 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 LDOC1O95751 146 aaPredicted RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 ADH1BP00325 375 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 WNT1P04628 370 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 GOT1P17174 413 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 C5AR1P21730 350 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 HNF1BP35680 557 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 NNMTP40261 264 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 CTSOP43234 321 aaPredicted RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 GPD2P43304 727 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 RPL34P49207 117 aaKnown RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 ARRB1P49407 418 aaPredicted RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 NUCB2P80303 420 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 GCNT1Q02742 428 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 STIM1Q13586 685 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 SLC12A1Q13621 1099 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 SLC45A4Q5BKX6 768 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 MMS22LQ6ZRQ5 1243 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 BEND5Q7L4P6 421 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 LMO3Q8TAP4 145 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 SAP25Q8TEE9 199 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 PTPRN2Q92932 1015 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 KAT5Q92993 513 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 FAM149B1Q96BN6 582 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 MYEOVQ96EZ4 313 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 DHTKD1Q96HY7 919 aaPredicted RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 CNDP2Q96KP4 475 aaKnown RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 CEP63Q96MT8 703 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 TRIM62Q9BVG3 475 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 ST7Q9NRC1 585 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 SLCO3A1Q9UIG8 710 aa11.05□□□□□ -0.64
VPS26B-203ENST00000525918 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
VPS26B-203ENST00000525918 TBC1D3DA0A087WVF3 549 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 TBC1D3IA0A087WXS9 549 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 TBC1D3EA0A087X179 549 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 TBC1D3KA0A087X1G2 549 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 A0A1W2PR77 199 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 GOLGA6L4A6NEF3 574 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 TBC1D3FA6NER0 549 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-203ENST00000525918 EIF4E1BA6NMX2 242 aaKnown RBP11.04□□□□□ -0.64
VPS26B-203ENST00000525918 TBC1D3LB9A6J9 549 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 TLR4O00206 839 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 PLK4O00444 970 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 PSMA7O14818 248 aa11.04□□□□□ -0.64
VPS26B-203ENST00000525918 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms