RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 SGSM3Q96HU1 749 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 TLR8Q9NR97 1041 aaKnown RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 IL37Q9NZH6 218 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 SMG5Q9UPR3 1016 aaKnown RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 NEU3Q9UQ49 428 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 CXorf49A8MYA2 514 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 E9PAM4 449 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 GOLGA8RI6L899 631 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 FGF10O15520 208 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 PRPF4O43172 522 aaKnown RBP eCLIP15.66■□□□□ 0.1
BEST1-204ENST00000524926 JCHAINP01591 159 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 GSTA2P09210 222 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 HAPLN1P10915 354 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 SLC2A3P11169 496 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 MGAT1P26572 445 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 RPA3P35244 121 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 SF3A3Q12874 501 aaKnown RBP eCLIP15.66■□□□□ 0.1
BEST1-204ENST00000524926 MSANTD2Q6P1R3 559 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 SLC26A11Q86WA9 606 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 FBXO22Q8NEZ5 403 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 DIS3LQ8TF46 1054 aaKnown RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 CKAP2Q8WWK9 683 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 KLF6Q99612 283 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 TMEM39AQ9NV64 488 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 MPP6Q9NZW5 540 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 TRHDEQ9UKU6 1024 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 MAGED2Q9UNF1 606 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 TCP11X1B4DZS4 312 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 C2CD2LO14523 706 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 VNN2O95498 520 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 MT-ND3P03897 115 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 RPL17P18621 184 aaKnown RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 PRKCHP24723 683 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 HTR7P34969 479 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 MLLT6P55198 1093 aaPredicted RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 IL9RQ01113 521 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 SPOUT1Q5T280 376 aaKnown RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 RASIP1Q5U651 963 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 TRMT10BQ6PF06 316 aaKnown RBP15.66■□□□□ 0.1
BEST1-204ENST00000524926 ARHGAP36Q6ZRI8 547 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 C14orf80Q86SX3 495 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 USP33Q8TEY7 942 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 SEC16BQ96JE7 1060 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 VAT1Q99536 393 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 PCDHA11Q9Y5I1 949 aa15.66■□□□□ 0.1
BEST1-204ENST00000524926 TANC1Q9C0D5 1861 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
BEST1-204ENST00000524926 FAM92AA1XBS5 289 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 USP12O75317 370 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 FAM155BO75949 473 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 CD68P34810 354 aaPredicted RBP15.65■□□□□ 0.1
BEST1-204ENST00000524926 RPL10AP62906 217 aaKnown RBP15.65■□□□□ 0.1
BEST1-204ENST00000524926 OLIG2Q13516 323 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 USP41Q3LFD5 358 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 C10orf120Q5SQS8 335 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 MANEALQ5VSG8 457 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 ITPRIPL1Q6GPH6 555 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 KIAA1841Q6NSI8 718 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 ATPAF2Q8N5M1 289 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.65■□□□□ 0.1
BEST1-204ENST00000524926 MZB1Q8WU39 189 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 SLC39A13Q96H72 371 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 SPATA17Q96L03 361 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 OXCT2Q9BYC2 517 aaPredicted RBP15.65■□□□□ 0.1
BEST1-204ENST00000524926 NDFIP2Q9NV92 336 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 CLIC5Q9NZA1 410 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 VANGL2Q9ULK5 521 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 ARHGAP42A6NI28 874 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 ANKRD65E5RJM6 399 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 ADAM12O43184 909 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 C1QAP02745 245 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 HMBSP08397 361 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 NFKB1P19838 968 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 HOXC13P31276 330 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 WDR4P57081 412 aaKnown RBP15.65■□□□□ 0.1
BEST1-204ENST00000524926 PIK3R6Q5UE93 754 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 CNKSR3Q6P9H4 555 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 MICALCLQ6ZW33 695 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 CACNA2D3Q8IZS8 1091 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 LZTR1Q8N653 840 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 OR52K1Q8NGK4 314 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 C2orf15Q8WU43 125 aaKnown RBP15.65■□□□□ 0.1
BEST1-204ENST00000524926 C1orf74Q96LT6 269 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 TEKT5Q96M29 485 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 SLC39A8Q9C0K1 460 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 GBA3Q9H227 469 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 SMYD2Q9NRG4 433 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.65■□□□□ 0.1
BEST1-204ENST00000524926 MARCH2Q9P0N8 246 aa15.65■□□□□ 0.1
BEST1-204ENST00000524926 TYROBPO43914 113 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 CCNCP24863 283 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 OR1D2P34982 312 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 PSEN1P49768 467 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 SEPT7Q16181 437 aaKnown RBP15.64■□□□□ 0.09
BEST1-204ENST00000524926 PSMD5Q16401 504 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 NUGGCQ68CJ6 796 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 FAM117BQ6P1L5 589 aa15.64■□□□□ 0.09
BEST1-204ENST00000524926 SPATS2Q86XZ4 545 aaKnown RBP15.64■□□□□ 0.09
BEST1-204ENST00000524926 ARHGAP12Q8IWW6 846 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms