RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SLC4A8Q2Y0W8 1093 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 CERCAMQ5T4B2 595 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 CWC27Q6UX04 472 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF783Q6ZMS7 281 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 USP50Q70EL3 339 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 BCDIN3DQ7Z5W3 292 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DZIP1Q86YF9 867 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DENND1CQ8IV53 801 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 SFTPA1Q8IWL2 248 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 CNTROBQ8N137 903 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 SLC15A4Q8N697 577 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 SIRT6Q8N6T7 355 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 ADAMTS18Q8TE60 1221 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DIS3LQ8TF46 1054 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 SDR42E1Q8WUS8 393 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 TEKT1Q969V4 418 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 COQ8BQ96D53 544 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 GPATCH3Q96I76 525 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 PRR25Q96S07 402 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 MMS19Q96T76 1030 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 P2RX7Q99572 595 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 FSD1Q9BTV5 496 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 TRIM54Q9BYV2 358 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 GLIS2Q9BZE0 524 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DPH1Q9BZG8 443 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DNAJC18Q9H819 358 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 GGA3Q9NZ52 723 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 KLHL13Q9P2N7 655 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 IP6K2Q9UHH9 426 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 CPA4Q9UI42 421 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 AMFRQ9UKV5 643 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 AFG3L2Q9Y4W6 797 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 PAXBP1Q9Y5B6 917 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 SNX14Q9Y5W7 946 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 MUC3AQ02505 3323 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DOCK3Q8IZD9 2030 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 ZNFX1Q9P2E3 1918 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 THSD7BQ9C0I4 1608 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 FLT1P17948 1338 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 PASKQ96RG2 1323 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 BAZ2BQ9UIF8 2168 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 MGAMO43451 1857 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 COL2A1P02458 1487 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 TMEM232C9JQI7 657 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 M0R3H8 397 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 AP4M1O00189 453 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 FCHO1O14526 889 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 DSCR3O14972 297 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 INSIG1O15503 277 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 GPAA1O43292 621 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 FGAP02671 866 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 VEGFAP15692 232 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 FPR3P25089 353 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 PRKAG1P54619 331 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 SUMO2P61956 95 aaKnown RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 TCP10Q12799 353 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 PICALMQ13492 652 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 FHL1Q13642 323 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF268Q14587 947 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 DLGAP5Q15398 846 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 SHROOM1Q2M3G4 852 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 TMEM63BQ5T3F8 832 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 IFIT1BQ5T764 474 aaKnown RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 MOB2Q70IA6 237 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 DAAM2Q86T65 1068 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 NANOGP1Q8N7R0 232 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF398Q8TD17 642 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 CUL5Q93034 780 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 HOOK2Q96ED9 719 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 AIFM3Q96NN9 605 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 STRBPQ96SI9 672 aaKnown RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 IDI2Q9BXS1 227 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 TMEM39BQ9GZU3 492 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 LSG1Q9H089 658 aaKnown RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 OSBPL5Q9H0X9 879 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 VEZTQ9HBM0 779 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 AASDHPPTQ9NRN7 309 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 ZSCAN32Q9NX65 697 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 GABBR1Q9UBS5 961 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 HDAC9Q9UKV0 1011 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 PNMA8BQ9ULN7 279 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-208ENST00000524652 PIEZO1Q92508 2521 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 CCDC171Q6TFL3 1326 aa3.43□□□□□ -1.86
CSDE1-208ENST00000524652 LCTP09848 1927 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 LAMA2P24043 3122 aaKnown RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 A0A0G2JMZ2 1700 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 A0A1W2PPL8 197 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 E2F8A0AVK6 867 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 MYMKA6NI61 221 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 PSMD9O00233 223 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 IGSF3O75054 1194 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 GCATO75600 419 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 ZFYP08048 801 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 HSPD1P10809 573 aaKnown RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 HTR1BP28222 390 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 GKP32189 559 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 ALDH5A1P51649 535 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 HTRA4P83105 476 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 RAB32Q13637 225 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms