RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 SNRNP27Q8WVK2 155 aaKnown RBP9.67□□□□□ -0.86
PTPN12-216ENST00000523952 KLHDC7BQ96G42 594 aa9.67□□□□□ -0.86
PTPN12-216ENST00000523952 HEXIM2Q96MH2 286 aaKnown RBP9.67□□□□□ -0.86
PTPN12-216ENST00000523952 IPO9Q96P70 1041 aaKnown RBP9.67□□□□□ -0.86
PTPN12-216ENST00000523952 SATB2Q9UPW6 733 aa9.67□□□□□ -0.86
PTPN12-216ENST00000523952 USP3Q9Y6I4 520 aa9.67□□□□□ -0.86
PTPN12-216ENST00000523952 NEMP2A6NFY4 417 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 TRIM38O00635 465 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 LATS1O95835 1130 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 ZBED1O96006 694 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 ASS1P00966 412 aaKnown RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 CSKP41240 450 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 ASPAP45381 313 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 SLC11A2P49281 568 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 TKTL1P51854 596 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 PPP2CBP62714 309 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 PPP2CAP67775 309 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 INCA1Q0VD86 236 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 CDH18Q13634 790 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 TRIP4Q15650 581 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 POM121L1PQ3SYA9 428 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 ZNF394Q53GI3 561 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 USP53Q70EK8 1073 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 EPM2AIP1Q7L775 607 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 SPATS2Q86XZ4 545 aaKnown RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 ARL14Q8N4G2 192 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 HJURPQ8NCD3 748 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 TMX3Q96JJ7 454 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 TWNKQ96RR1 684 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 DDX50Q9BQ39 737 aaKnown RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 CUEDC2Q9H467 287 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 CYP3A43Q9HB55 503 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 LRRC4Q9HBW1 653 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 SFMBT1Q9UHJ3 866 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 DMTF1Q9Y222 760 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 ZFC3H1O60293 1989 aaKnown RBP9.66□□□□□ -0.86
PTPN12-216ENST00000523952 BOD1L1Q8NFC6 3051 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 UNC13CQ8NB66 2214 aa9.66□□□□□ -0.86
PTPN12-216ENST00000523952 A0A087X0B3 334 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 A0A1B0GVM2 712 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 TTC34A8MYJ7 566 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 PRAMEF26H0Y7S4 382 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 IRAK2O43187 625 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 HLA-DRAP01903 254 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 GP1BAP07359 652 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 SRPRAP08240 638 aaKnown RBP9.65□□□□□ -0.86
PTPN12-216ENST00000523952 CKMT1AP12532 417 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 DGKAP23743 735 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 RABEP1Q15276 862 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 KNOP1Q1ED39 458 aaKnown RBP9.65□□□□□ -0.86
PTPN12-216ENST00000523952 ZACNQ401N2 412 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 ARSIQ5FYB1 569 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 MPP7Q5T2T1 576 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 CDCP2Q5VXM1 449 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 RFWD3Q6PCD5 774 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 KANSL1Q7Z3B3 1105 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 KIAA0907Q7Z7F0 614 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-216ENST00000523952 DSG4Q86SJ6 1040 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 PIGZQ86VD9 579 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 UNC45BQ8IWX7 931 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 C12orf56Q8IXR9 622 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 ZC3H3Q8IXZ2 948 aaKnown RBP9.65□□□□□ -0.86
PTPN12-216ENST00000523952 SIX6OS1Q8N1H7 587 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 STK40Q8N2I9 435 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 AADATQ8N5Z0 425 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 IFI44Q8TCB0 444 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 WFDC5Q8TCV5 224 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 EDEM1Q92611 657 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 DHX58Q96C10 678 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 APOLD1Q96LR9 279 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 CCNL2Q96S94 520 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-216ENST00000523952 MYOCQ99972 504 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 CALN1Q9BXU9 219 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 USP29Q9HBJ7 922 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 SLC39A2Q9NP94 309 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 ASCL3Q9NQ33 180 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 CYTH4Q9UIA0 394 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 ERVW-1Q9UQF0 538 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 FRMD4BQ9Y2L6 1034 aa9.65□□□□□ -0.86
PTPN12-216ENST00000523952 FLNCQ14315 2725 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 MSI1O43347 362 aaKnown RBP9.64□□□□□ -0.87
PTPN12-216ENST00000523952 LATO43561 262 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 GJB6O95452 261 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 CENPBP07199 599 aaPredicted RBP9.64□□□□□ -0.87
PTPN12-216ENST00000523952 THEGLP0DJG4 465 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 SFTPCP11686 197 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 ZNF18P17022 549 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 PDCP20941 246 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 SGSHP51688 502 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 INHBCP55103 352 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 DLG4P78352 724 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 CLDN10P78369 228 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 NUCB2P80303 420 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 NFKB2Q00653 900 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 ECT2LQ008S8 904 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 ELAVL3Q14576 367 aaKnown RBP9.64□□□□□ -0.87
PTPN12-216ENST00000523952 STK38Q15208 465 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 ISXQ2M1V0 245 aa9.64□□□□□ -0.87
PTPN12-216ENST00000523952 C9orf64Q5T6V5 341 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms