RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 MANEALQ5VSG8 457 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 TTC39BQ5VTQ0 682 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-224ENST00000523873 MBLAC2Q68D91 279 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 TXNRD3NBQ6F5E7 133 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
VEGFA-224ENST00000523873 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 KIAA0907Q7Z7F0 614 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-224ENST00000523873 CCDC170Q8IYT3 715 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 AHI1Q8N157 1196 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.297e-8■■□□□ 11.5
VEGFA-224ENST00000523873 IL17RCQ8NAC3 791 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 HHIPQ96QV1 700 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 KCTD15Q96SI1 283 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-224ENST00000523873 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
VEGFA-224ENST00000523873 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 DHX35Q9H5Z1 703 aaKnown RBP13.21□□□□□ -0.29
VEGFA-224ENST00000523873 ZWILCHQ9H900 591 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 ELOVL2Q9NXB9 296 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 CACNA2D2Q9NY47 1150 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 UVRAGQ9P2Y5 699 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 OR12D3Q9UGF7 316 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 AP4E1Q9UPM8 1137 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 NEU3Q9UQ49 428 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 STARD13Q9Y3M8 1113 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 RAD54BQ9Y620 910 aa13.21□□□□□ -0.29
VEGFA-224ENST00000523873 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 GOLGA6L6A8MZA4 724 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 K7ESF4 209 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 MYO1FO00160 1098 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ADAM23O75077 832 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 GJC1P36383 396 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 IL12RB1P42701 662 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 SSR1P43307 286 aaKnown RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 PXNP49023 591 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 CCR3P51677 355 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ZNF177Q13360 481 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 PIGHQ14442 188 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 DMC1Q14565 340 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 MESDQ14696 234 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 SPA17Q15506 151 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 PITRM1Q5JRX3 1037 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 KCNT1Q5JUK3 1230 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 HEATR6Q6AI08 1181 aaKnown RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ZNF366Q8N895 744 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 WFIKKN2Q8TEU8 576 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ACDQ96AP0 544 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 TMEM51Q9NW97 253 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 KIAA1522Q9P206 1035 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ZNF212Q9UDV6 495 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
VEGFA-224ENST00000523873 ANKRD36A6QL64 1941 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 SPAG17Q6Q759 2223 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 ATG13O75143 517 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 CLDN11O75508 207 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 PROSCO94903 275 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 RHOCP08134 193 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 SP9P0CG40 484 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 TDGF1P13385 188 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 HLA-EP13747 358 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 POLR2EP19388 210 aaKnown RBP13.19□□□□□ -0.3
VEGFA-224ENST00000523873 PRKCHP24723 683 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 L1CAMP32004 1257 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 TAS2R40P59535 323 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 NRG1Q02297 640 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-224ENST00000523873 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
VEGFA-224ENST00000523873 SEMA3BQ13214 749 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 ZNF234Q14588 700 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 PTPRNQ16849 979 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 RNF219Q5W0B1 726 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-224ENST00000523873 SYT13Q7L8C5 426 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 CHPFQ8IZ52 775 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 ATRIPQ8WXE1 791 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 HSPH1Q92598 858 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 ALG14Q96F25 216 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 FAM86C1Q9NVL1 165 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-224ENST00000523873 PPARGC1AQ9UBK2 798 aaKnown RBP13.19□□□□□ -0.3
VEGFA-224ENST00000523873 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 INTUQ9ULD6 942 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms