RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 CEBPBP17676 345 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 ITGB5P18084 799 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 RHCEP18577 417 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MUTP22033 750 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 GDI1P31150 447 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 PTGER3P43115 390 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 SEMG2Q02383 582 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 SPIRE1Q08AE8 756 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 CCDC173Q0VFZ6 552 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MYO1EQ12965 1108 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 TMED1Q13445 227 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MTX1Q13505 466 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 GTF2H3Q13889 308 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 HNRNPDQ14103 355 aaKnown RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 KIR3DS1Q14943 382 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 NR1I3Q14994 352 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 PCBP1Q15365 356 aaKnown RBP eCLIP5.5□□□□□ -1.532e-18■■□□□ 12.2
PABPC1-223ENST00000523636 SEPT7Q16181 437 aaKnown RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 SLC9C2Q5TAH2 1124 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 BICRALQ6AI39 1079 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 GALNT17Q6IS24 598 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 TLDC1Q6P9B6 456 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 PAQR3Q6TCH7 311 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 ATG14Q6ZNE5 492 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 ERICH1Q86X53 443 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 KIF18BQ86Y91 864 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 IQCF2Q8IXL9 164 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 CBARPQ8N350 705 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 CARNMT1Q8N4J0 409 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 CPA6Q8N4T0 437 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MGARPQ8TDB4 240 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 ITFG2Q969R8 447 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 JAKMIP2Q96AA8 810 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 RSPRY1Q96DX4 576 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 SEC62Q99442 399 aaKnown RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 PDCD2LQ9BRP1 358 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 POLR3CQ9BUI4 534 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 GTPBP4Q9BZE4 634 aaKnown RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MYLK2Q9H1R3 596 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MLXIPQ9HAP2 919 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 AGO4Q9HCK5 861 aaKnown RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 MRPL17Q9NRX2 175 aaKnown RBP5.5□□□□□ -1.53
PABPC1-223ENST00000523636 STARD5Q9NSY2 213 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 ZBTB40Q9NUA8 1239 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 TBC1D13Q9NVG8 400 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 GTF3C4Q9UKN8 822 aa5.5□□□□□ -1.53
PABPC1-223ENST00000523636 WDR19Q8NEZ3 1342 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 ACANP16112 2415 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MYBPHLA2RUH7 354 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 SLC38A8A6NNN8 435 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 A6NNZ2 444 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 B4DLN1 442 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 CCL16O15467 120 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 NMT2O60551 498 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MAFKO60675 156 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 OPHN1O60890 802 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 DDHD2O94830 711 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 GLI1P08151 1106 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 JMJD7P0C870 316 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 UBTFL1P0CB47 393 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MYBL2P10244 700 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 INSRRP14616 1297 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MAN2A2P49641 1150 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MRPL12P52815 198 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MLLT6P55198 1093 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 TLE1Q04724 770 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 ZNF460Q14592 562 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 PSMD6Q15008 389 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 PON2Q15165 354 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 CCNG2Q16589 344 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 FAM78AQ5JUQ0 283 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 DGKKQ5KSL6 1271 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 HECTD3Q5T447 861 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 FYB2Q5VWT5 728 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 METTL7BQ6UX53 244 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 ENOSF1Q7L5Y1 443 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 ZSWIM9Q86XI8 627 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 DCP2Q8IU60 420 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 IRF2BP1Q8IU81 584 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 CEP57L1Q8IYX8 460 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 HDDC3Q8N4P3 179 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 FRMD1Q8N878 549 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 GIMAP1Q8WWP7 306 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 SEC14L1Q92503 715 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 INTS4Q96HW7 963 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 B3GALT6Q96L58 329 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 FNBP1Q96RU3 617 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 MAP7D2Q96T17 732 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 PCYT2Q99447 389 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 CHCHD6Q9BRQ6 235 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 TRMT61BQ9BVS5 477 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 GTPBP2Q9BX10 602 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 NUSAP1Q9BXS6 441 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 WDR12Q9GZL7 423 aaKnown RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 SUDS3Q9H7L9 328 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-223ENST00000523636 CYP4F11Q9HBI6 524 aa5.49□□□□□ -1.53
PABPC1-223ENST00000523636 SLC6A20Q9NP91 592 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms