RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 GLIS1Q8NBF1 620 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 RIN3Q8TB24 985 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 UTP11Q9Y3A2 253 aaKnown RBP9.61□□□□□ -0.87
SDCBP-212ENST00000523483 TRIOO75962 3097 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ETFBP38117 255 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ZNF177Q13360 481 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 EIF4EBP2Q13542 120 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 DPYSQ14117 519 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 CCNG2Q16589 344 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 FAM78AQ5JUQ0 283 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 POTEHQ6S545 545 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ARHGAP36Q6ZRI8 547 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 JAMLQ86YT9 394 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ATPAF2Q8N5M1 289 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 KXD1Q9BQD3 176 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 CLUHO75153 1309 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 BNIP3LO60238 219 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 RAMP2O60895 175 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 IGLV3-27P01718 113 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 TGM2P21980 687 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 MFN1Q8IWA4 741 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ATL2Q8NHH9 583 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 PRICKLE1Q96MT3 831 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 AGAP3Q96P47 875 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 CDX2Q99626 313 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 BBS2Q9BXC9 721 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 POMKQ9H5K3 350 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ARHGAP26Q9UNA1 814 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 PATJQ8NI35 1801 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 A0A0D9SEW6 157 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 CBX4O00257 560 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 C1RP00736 705 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 CYBBP04839 570 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 EPHA5P54756 1037 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 BASP1P80723 227 aaKnown RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 SLC7A9P82251 487 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 ITKQ08881 620 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 SEMA3BQ13214 749 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 KCNC3Q14003 757 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 POLD3Q15054 466 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 OR7D4Q8NG98 312 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 TFB1MQ8WVM0 346 aaKnown RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 RIPOR3Q96MK2 946 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 DDX50Q9BQ39 737 aaKnown RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 EBF3Q9H4W6 596 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 SP110Q9HB58 689 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 HOMER3Q9NSC5 361 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 DNAJC17Q9NVM6 304 aaKnown RBP9.6□□□□□ -0.87
SDCBP-212ENST00000523483 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
SDCBP-212ENST00000523483 MYO18AQ92614 2054 aaKnown RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 A0A1W2PPC1 479 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 PPP1R12AO14974 1030 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 DCLK1O15075 740 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 OLFM2O95897 454 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 KRT14P02533 472 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 RHOCP08134 193 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 HOXB8P17481 243 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 CHKAP35790 457 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 GPS1Q13098 491 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 NOMO1Q15155 1222 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 RTL10Q7L3V2 364 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 CCDC25Q86WR0 208 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 TMEM25Q86YD3 366 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 YAF2Q8IY57 180 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 PAF1Q8N7H5 531 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 RTL3Q8N8U3 475 aaKnown RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 SLC39A8Q9C0K1 460 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 KLHL8Q9P2G9 620 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 RCOR3Q9P2K3 495 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 MYOFQ9NZM1 2061 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 GOLGA8MH3BSY2 632 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 FGF10O15520 208 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 DDX6P26196 483 aaKnown RBP eCLIP9.59□□□□□ -0.874e-7■□□□□ 9.8
SDCBP-212ENST00000523483 LTBRP36941 435 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 ACVRL1P37023 503 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 IFNAR2P48551 515 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 TNK2Q07912 1038 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 PDK1Q15118 436 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 GRK7Q8WTQ7 553 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 SMARCD2Q92925 531 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 ERLEC1Q96DZ1 483 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 HMCESQ96FZ2 354 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 C1orf74Q96LT6 269 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 MYADMQ96S97 322 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 PNKPQ96T60 521 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 FERMT1Q9BQL6 677 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 LRRC19Q9H756 370 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 ZFP14Q9HCL3 533 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 DUS2Q9NX74 493 aaKnown RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 VPS28Q9UK41 221 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 HEPACAM2A8MVW5 462 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 LMAN1P49257 510 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 PLTPP55058 493 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms