RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 FAM237AA0A1B0GTK4 181 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 PRCPP42785 496 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 TARDBPQ13148 414 aaKnown RBP eCLIP26.85■■□□□ 1.891e-6■■■■□ 23.1
PVT1-219ENST00000523427 RNF219Q5W0B1 726 aaPredicted RBP26.85■■□□□ 1.89
PVT1-219ENST00000523427 SCML4Q8N228 414 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 STK40Q8N2I9 435 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 UBR7Q8N806 425 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 SAP25Q8TEE9 199 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 FCRL2Q96LA5 508 aaPredicted RBP26.85■■□□□ 1.89
PVT1-219ENST00000523427 PCDHGA1Q9Y5H4 931 aa26.85■■□□□ 1.89
PVT1-219ENST00000523427 TBXAS1P24557 533 aaPredicted RBP26.84■■□□□ 1.89
PVT1-219ENST00000523427 BNIP3Q12983 259 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 PNOCQ13519 176 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 DCAF6Q58WW2 860 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 MS4A13Q5J8X5 152 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 HES3Q5TGS1 186 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 ANKRD40Q6AI12 368 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 AADATQ8N5Z0 425 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 DQX1Q8TE96 717 aaKnown RBP26.84■■□□□ 1.89
PVT1-219ENST00000523427 ZSWIM1Q9BR11 485 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 ARMCX3Q9UH62 379 aaPredicted RBP26.84■■□□□ 1.89
PVT1-219ENST00000523427 NAALADL1Q9UQQ1 740 aa26.84■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3DA0A087WVF3 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3IA0A087WXS9 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3EA0A087X179 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3KA0A087X1G2 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 TARSL2A2RTX5 802 aaKnown RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3FA6NER0 549 aaPredicted RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3LB9A6J9 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 E9PAM4 449 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 RNF225M0QZC1 329 aaPredicted RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 LUC7L3O95232 432 aaKnown RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 MOCS3O95396 460 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 IL1BP01584 269 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3HP0C7X1 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 ARRB1P49407 418 aaPredicted RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3GQ6DHY5 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3CQ6IPX1 549 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 LRRC69Q6ZNQ3 347 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 SND1Q7KZF4 910 aaKnown RBP eCLIP26.83■■□□□ 1.89
PVT1-219ENST00000523427 TBC1D3Q8IZP1 549 aaPredicted RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 APCDD1Q8J025 514 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 LGI2Q8N0V4 545 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 KAT5Q92993 513 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 AZIN2Q96A70 460 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 FAM149B1Q96BN6 582 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 FAM129BQ96TA1 746 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 IRX2Q9BZI1 471 aaPredicted RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 ST7Q9NRC1 585 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 XPO7Q9UIA9 1087 aaKnown RBP26.83■■□□□ 1.89
PVT1-219ENST00000523427 FZD4Q9ULV1 537 aa26.83■■□□□ 1.89
PVT1-219ENST00000523427 EDDM13A0A1B0GTR0 161 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 A0A1W2PR77 199 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 TLR4O00206 839 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 SLC16A3O15427 465 aaKnown RBP26.82■■□□□ 1.88
PVT1-219ENST00000523427 TLX3O43711 291 aaPredicted RBP26.82■■□□□ 1.88
PVT1-219ENST00000523427 PAEPP09466 180 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 GOT1P17174 413 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 ACADVLP49748 655 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 STK19P49842 368 aaPredicted RBP26.82■■□□□ 1.88
PVT1-219ENST00000523427 PMS1P54277 932 aaKnown RBP26.82■■□□□ 1.88
PVT1-219ENST00000523427 NUCB2P80303 420 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 FKBP3Q00688 224 aaKnown RBP26.82■■□□□ 1.88
PVT1-219ENST00000523427 ECT2LQ008S8 904 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 CNGA2Q16280 664 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 PPM1KQ8N3J5 372 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 SERPINB11Q96P15 392 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 ADAMTS1Q9UHI8 967 aa26.82■■□□□ 1.88
PVT1-219ENST00000523427 TRIM49BA6NDI0 452 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 FYNP06241 537 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 SRPRAP08240 638 aaKnown RBP26.81■■□□□ 1.88
PVT1-219ENST00000523427 VAV1P15498 845 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 EPHA8P29322 1005 aaPredicted RBP26.81■■□□□ 1.88
PVT1-219ENST00000523427 MAT2AP31153 395 aaKnown RBP26.81■■□□□ 1.88
PVT1-219ENST00000523427 EIF2S3P41091 472 aaKnown RBP26.81■■□□□ 1.88
PVT1-219ENST00000523427 CCR5P51681 352 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 ADPRHP54922 357 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 PPP2CBP62714 309 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 PPP2CAP67775 309 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 SLC45A4Q5BKX6 768 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 RAP1GAP2Q684P5 730 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 SLC35C1Q96A29 364 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 NT5C1BQ96P26 610 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 UBL7Q96S82 380 aaPredicted RBP26.81■■□□□ 1.88
PVT1-219ENST00000523427 GDPD2Q9HCC8 539 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 ZDHHC9Q9Y397 364 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 RAI2Q9Y5P3 530 aa26.81■■□□□ 1.88
PVT1-219ENST00000523427 TP53BP1Q12888 1972 aaPredicted RBP26.8■■□□□ 1.88
PVT1-219ENST00000523427 A0A1W2PQ27 194 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 A0A1W2PQ64 194 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 FBXO21O94952 628 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 C5AR1P21730 350 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 NXPH1P58417 271 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 CHSY1Q86X52 802 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 PTPRN2Q92932 1015 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 HSFY1Q96LI6 401 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 TLR6Q9Y2C9 796 aa26.8■■□□□ 1.88
PVT1-219ENST00000523427 YKT6O15498 198 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 ADH1BP00325 375 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms