RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 SYT10Q6XYQ8 523 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 ANKS1BQ7Z6G8 1248 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 LGI2Q8N0V4 545 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 CPXM2Q8N436 756 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 NAT16Q8N8M0 369 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 TSC1Q92574 1164 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 BHMTQ93088 406 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
PVT1-215ENST00000522963 P2RY11Q96G91 374 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 PRICKLE1Q96MT3 831 aaPredicted RBP12.3□□□□□ -0.44
PVT1-215ENST00000522963 P2RY13Q9BPV8 354 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
PVT1-215ENST00000522963 DNAI1Q9UI46 699 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 VANGL2Q9ULK5 521 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 F5H5T6 163 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 H0Y858 1186 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
PVT1-215ENST00000522963 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 ZRANB2O95218 330 aaKnown RBP eCLIP12.29□□□□□ -0.44
PVT1-215ENST00000522963 PYGMP11217 842 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 GOT1P17174 413 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 IL4RP24394 825 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 SLC6A11P48066 632 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 IRAK1P51617 712 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 KDSRQ06136 332 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 ZNF211Q13398 564 aaPredicted RBP12.29□□□□□ -0.44
PVT1-215ENST00000522963 LRRC32Q14392 662 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 PDK2Q15119 407 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 ACBD5Q5T8D3 534 aaPredicted RBP12.29□□□□□ -0.44
PVT1-215ENST00000522963 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 MFSD7Q6UXD7 560 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 TMEM25Q86YD3 366 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 RCOR2Q8IZ40 523 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 EXD1Q8NHP7 514 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 EXOC4Q96A65 974 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 OTUB2Q96DC9 234 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 TBC1D31Q96DN5 1066 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 CSPG4P5Q96PW8 444 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 PSMB7Q99436 277 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 NAPGQ99747 312 aaPredicted RBP12.29□□□□□ -0.44
PVT1-215ENST00000522963 EPAS1Q99814 870 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
PVT1-215ENST00000522963 FBRSL1Q9HCM7 1045 aaKnown RBP12.29□□□□□ -0.44
PVT1-215ENST00000522963 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
PVT1-215ENST00000522963 MUC6Q6W4X9 2439 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 IGLV3-10A0A075B6K4 115 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CTAGE9A4FU28 777 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 NEDD8-MDP1E9PL57 170 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 H3BRJ5 948 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 EEF2KO00418 725 aaKnown RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 KCNK3O14649 394 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 EGFP01133 1207 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CHRNB1P11230 501 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 HOXC13P31276 330 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CASQ1P31415 396 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CXCR5P32302 372 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CHKAP35790 457 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 ARL4AP40617 200 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CDKN2BP42772 138 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 HCAR3P49019 387 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 TPI1P60174 286 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 RPS24P62847 133 aaKnown RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 GAD2Q05329 585 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 FZD5Q13467 585 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 LLGL1Q15334 1064 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 TAZQ16635 292 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 FSTL4Q6MZW2 842 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 Q6ZS52 159 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 RFX8Q6ZV50 586 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 C12orf40Q86WS4 652 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CIR1Q86X95 450 aaPredicted RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 MAP7D3Q8IWC1 876 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CFAP52Q8N1V2 620 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 FAF2Q96CS3 445 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 RPRD1AQ96P16 312 aaPredicted RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 ZNF670Q9BS34 389 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 BBS2Q9BXC9 721 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 CALN1Q9BXU9 219 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 SPHK2Q9NRA0 654 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 DLGAP2Q9P1A6 1054 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 PPARGC1AQ9UBK2 798 aaKnown RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 SNX12Q9UMY4 172 aa12.28□□□□□ -0.44
PVT1-215ENST00000522963 MYO18AQ92614 2054 aaKnown RBP12.28□□□□□ -0.44
PVT1-215ENST00000522963 ZNF487B1APH4 448 aa12.27□□□□□ -0.45
PVT1-215ENST00000522963 LAMTOR5O43504 91 aa12.27□□□□□ -0.45
PVT1-215ENST00000522963 ZNF500O60304 480 aaPredicted RBP12.27□□□□□ -0.45
PVT1-215ENST00000522963 CNTN5O94779 1100 aa12.27□□□□□ -0.45
PVT1-215ENST00000522963 KRT10P13645 584 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms