RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RNFT2Q96EX2 444 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 VPS50Q96JG6 964 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 SYNPO2LQ9H987 977 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 VPS37BQ9H9H4 285 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 ABCB8Q9NUT2 735 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 MOCS1Q9NZB8 636 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 HSPBP1Q9NZL4 362 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 SAE1Q9UBE0 346 aaPredicted RBP4.22□□□□□ -1.73
SKP1-209ENST00000522552 DNAJB11Q9UBS4 358 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 SEC63Q9UGP8 760 aaKnown RBP4.22□□□□□ -1.73
SKP1-209ENST00000522552 VPS51Q9UID3 782 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 CDH22Q9UJ99 828 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 APPL1Q9UKG1 709 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 MKLN1Q9UL63 735 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 C2CD2Q9Y426 696 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 A0A0B4J203 849 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 AGAP5A6NIR3 686 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CDRT15L2A8MXV6 281 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 M0QYT0 321 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 MCF2LO15068 1137 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 VEGFDO43915 354 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 PEX11AO75192 247 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ALDH1A2O94788 518 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 TPPPO94811 219 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 OPN1MWP04001 364 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 OPN1MW2P0DN77 364 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 OPN1MW3P0DN78 364 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 NTSR1P30989 418 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ADMP35318 185 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ACAA2P42765 397 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 MATR3P43243 847 aaKnown RBP eCLIP4.21□□□□□ -1.746e-8■■■■□ 26.1
SKP1-209ENST00000522552 KIR2DL1P43626 348 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 KIR2DL2P43627 348 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 ZNF81P51508 661 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 PMS2P54278 862 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 YPEL5P62699 121 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 KCNJ10P78508 379 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 LMAN2Q12907 356 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 DUSP8Q13202 625 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 THOC5Q13769 683 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 BAATQ14032 418 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 ZIK1Q3SY52 487 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 ANKRD20A4Q4UJ75 823 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ANKRD20A8PQ5CZ79 823 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ANKRD20A2Q5SQ80 823 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 TTC39AQ5SRH9 613 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ANKRD20A1Q5TYW2 823 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ANKRD20A3Q5VUR7 823 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 MCTP1Q6DN14 999 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 KIAA0930Q6ICG6 404 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 ZCCHC12Q6PEW1 402 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 FIP1L1Q6UN15 594 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 TEPPQ6URK8 271 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 LIPIQ6XZB0 460 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 RBPMS2Q6ZRY4 209 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 PARS2Q7L3T8 475 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 OTUD6AQ7L8S5 288 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 PPP1R32Q7Z5V6 425 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ADCK1Q86TW2 530 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 LDHDQ86WU2 507 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 RHPN2Q8IUC4 686 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 PLD5Q8N7P1 536 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 MRPL43Q8N983 215 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 XXYLT1Q8NBI6 393 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CNNM3Q8NE01 707 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 SMARCC2Q8TAQ2 1214 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 MDM1Q8TC05 714 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CTNNBL1Q8WYA6 563 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 SCAMP4Q969E2 229 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 SMARCE1Q969G3 411 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 LRRC59Q96AG4 307 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 MIEF2Q96C03 454 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CDCA5Q96FF9 252 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 C1orf74Q96LT6 269 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 KLHL15Q96M94 604 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 C5orf34Q96MH7 638 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CFAP57Q96MR6 1250 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 FAM118BQ9BPY3 351 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CLSTN3Q9BQT9 956 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 SRSF8Q9BRL6 282 aaKnown RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 MLPHQ9BV36 600 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 CCDC106Q9BWC9 280 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 STRA6Q9BX79 667 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 TRIM7Q9C029 511 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 SLC5A7Q9GZV3 580 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 ABCG8Q9H221 673 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 HOXC10Q9NYD6 342 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 WSB2Q9NYS7 404 aaPredicted RBP4.21□□□□□ -1.74
SKP1-209ENST00000522552 LRIT1Q9P2V4 623 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 HESX1Q9UBX0 185 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 FBXL17Q9UF56 701 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 CD207Q9UJ71 328 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 OSGIN1Q9UJX0 560 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 NENFQ9UMX5 172 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 KCNK7Q9Y2U2 307 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 PCDHA10Q9Y5I2 948 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 TAF6LQ9Y6J9 622 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 SESN1Q9Y6P5 492 aa4.21□□□□□ -1.74
SKP1-209ENST00000522552 LOC105369274A0A096LPK9 316 aa4.2□□□□□ -1.74
SKP1-209ENST00000522552 GPR75-ASB3A0A0A6YYF3 556 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms