RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CLK1P49759 484 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 SERPINH1P50454 418 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 ZC3H12AQ5D1E8 599 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 MRPL48Q96GC5 212 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 DPY30Q9C005 99 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 DNAJC16Q9Y2G8 782 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 CXCL14O95715 111 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 PLOD1Q02809 727 aaPredicted RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 OVGP1Q12889 678 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 CCDC153Q494R4 210 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 KCNK18Q7Z418 384 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 PIGZQ86VD9 579 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 OR56A4Q8NGH8 313 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 SPATA20Q8TB22 786 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 VMP1Q96GC9 406 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 CPNE1Q99829 537 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 MAF1Q9H063 256 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 RIC1Q4ADV7 1423 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 SLC2A4P14672 509 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 TFE3P19532 575 aaPredicted RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 ELK3P41970 407 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 SARSP49591 514 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 NAB1Q13506 487 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 ZNF544Q6NX49 715 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 LRRC8DQ7L1W4 858 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 GAS2L1Q99501 681 aaPredicted RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 TMBIM4Q9HC24 238 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 SH3BP4Q9P0V3 963 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 CRYL1Q9Y2S2 319 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 SIGLEC16A6NMB1 481 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 M0R3G1 203 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 MGAT1P26572 445 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 PRMT2P55345 433 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 PAGE2BQ5JRK9 111 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 RAP1GAP2Q684P5 730 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 FAM120BQ96EK7 910 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 CAPNS2Q96L46 248 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 DUSP9Q99956 384 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 ATP13A3Q9H7F0 1226 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 VHLP40337 213 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 TUSC3Q13454 348 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 PARP6Q2NL67 630 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 CDK20Q8IZL9 346 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 QRFPRQ96P65 431 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 CCT7Q99832 543 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 ZYG11BQ9C0D3 744 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 STARD13Q9Y3M8 1113 aa16.56■□□□□ 0.24
PCDHA3-201ENST00000522353 F8VP50 259 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 SERPINB5P36952 375 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 CBWD6Q4V339 395 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 FBXW10Q5XX13 1052 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 MYLPFQ96A32 169 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 FUCA2Q9BTY2 467 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 MLPHQ9BV36 600 aaPredicted RBP16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 QSOX1O00391 747 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 SELPP16109 830 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 DGKAP23743 735 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 HTR1BP28222 390 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 LRRC39Q96DD0 335 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 DDX3XO00571 662 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 UBDO15205 165 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 ASGR1P07306 291 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 SMAD3P84022 425 aaKnown RBP16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 CDK16Q00536 496 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 LPPQ93052 612 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 TMEM245Q9H330 911 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 ANKRD6Q9Y2G4 727 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 BTBD19C9JJ37 291 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 AMD1P17707 334 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 BMPR2Q13873 1038 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 SPPL2BQ8TCT7 592 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 GRIN3AQ8TCU5 1115 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 STARD8Q92502 1023 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 TTPALQ9BTX7 342 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 DDX28Q9NUL7 540 aaKnown RBP16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 ZNF510Q9Y2H8 683 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 PCDHAC2Q9Y5I4 1007 aa16.55■□□□□ 0.24
PCDHA3-201ENST00000522353 TPST1O60507 370 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 PEX6Q13608 980 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 C11orf74Q86VG3 221 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 SLC9A9Q8IVB4 645 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 MICU2Q8IYU8 434 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 HAS1Q92839 578 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 DEPDC5O75140 1603 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 WDR27A2RRH5 827 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 KPNA5O15131 536 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 CAPN15O75808 1086 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 CYP7B1O75881 506 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 PWP1Q13610 501 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 CAMKK1Q8N5S9 505 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 TOP6BLQ8N6T0 577 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 TDRD5Q8NAT2 981 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms