RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LATO43561 262 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 TNFSF15O95150 251 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 GJB6O95452 261 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 CST3P01034 146 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 GP1BAP07359 652 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 CASRP41180 1078 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 PLA2G4AP47712 749 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 CCR5P51681 352 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 PDX1P52945 283 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 GDF10P55107 478 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 PPP2CBP62714 309 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 PPP2CAP67775 309 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 DAB2P98082 770 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 CENPCQ03188 943 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 EHHADHQ08426 723 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 KLHDC10Q6PID8 442 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZNF720Q7Z2F6 126 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 GPRIN1Q7Z2K8 1008 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 KIAA0907Q7Z7F0 614 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 B3GALNT2Q8NCR0 500 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 OR6B3Q8NGW1 331 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 OR2T34Q8NGX1 318 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 APOLD1Q96LR9 279 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 SMOQ99835 787 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 BLOC1S4Q9NUP1 217 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 INTS13Q9NVM9 706 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 RBAKQ9NYW8 714 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 LSM7Q9UK45 103 aaKnown RBP9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 AGO1Q9UL18 857 aaKnown RBP9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 CA5BQ9Y2D0 317 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 PCNX1Q96RV3 2341 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 MID1O15344 667 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FFAR2O15552 330 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FAM13AO94988 1023 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 THEGLP0DJG4 465 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 HOXD9P28356 352 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 TTC31Q49AM3 519 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZNF776Q68DI1 518 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 SCD5Q86SK9 330 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FAM35AQ86V20 835 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 GPBP1Q86WP2 473 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FUKQ8N0W3 1084 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 OXR1Q8N573 874 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 AADATQ8N5Z0 425 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 GTF3C6Q969F1 213 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC2A11Q9BYW1 496 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 SNX25Q9H3E2 840 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZNF768Q9H5H4 540 aaKnown RBP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 FBRSQ9HAH7 460 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 ETNK1Q9HBU6 452 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 COMMD8Q9NX08 183 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 LRRK1Q38SD2 2015 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 CSMD2Q7Z408 3487 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 SDK2Q58EX2 2172 aa9.27□□□□□ -0.93
TRAPPC9-212ENST00000521944 A0A1W2PQH9 124 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC35F4A4IF30 521 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 HHLA1C9JL84 531 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 ITGA2BP08514 1039 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 RARGP13631 454 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC5A2P31639 672 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 AFMP43652 599 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 TRAPPC10P48553 1259 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 ADPRHP54922 357 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 TRIM29Q14134 588 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 DHX8Q14562 1220 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 NCAPHQ15003 741 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 POSTNQ15063 836 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 TLR1Q15399 786 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 NAPEPLDQ6IQ20 393 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 TMEM214Q6NUQ4 689 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 FAM217AQ8IXS0 508 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 DEPDC4Q8N2C3 294 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 MAPK15Q8TD08 544 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 GANCQ8TET4 914 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 MIB2Q96AX9 1013 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 ARRDC3Q96B67 414 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 CBWD1Q9BRT8 395 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 RAB34Q9BZG1 259 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 ABCG4Q9H172 646 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 CSNK1G1Q9HCP0 422 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 TLR8Q9NR97 1041 aaKnown RBP9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 PLA2G4CQ9UP65 541 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 SCML2Q9UQR0 700 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 PCDHGA11Q9Y5H2 935 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 HRH3Q9Y5N1 445 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 SPG11Q96JI7 2443 aa9.26□□□□□ -0.93
TRAPPC9-212ENST00000521944 LRRC72A6NJI9 287 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 A8MXQ7 604 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 SIN3BO75182 1162 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 RNASEH2AO75792 299 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 PIAS2O75928 621 aa9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 DLDP09622 509 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-212ENST00000521944 FAM163BP0C2L3 166 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms