RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 UBL7Q96S82 380 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 LRRC1Q9BTT6 524 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 TDP1Q9NUW8 608 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 DDX56Q9NY93 547 aaKnown RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 FEZ2Q9UHY8 353 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SLC6A14Q9UN76 642 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 OR6C75A6NL08 312 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 GABRDO14764 452 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 HUS1O60921 280 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PHF2O75151 1096 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 HNRNPLP14866 589 aaKnown RBP eCLIP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 ATF6P18850 670 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PCK1P35558 622 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 P2RY2P41231 377 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 LILRA4P59901 499 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 CRY1Q16526 586 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 OVOS1Q6IE37 1185 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 SYDE1Q6ZW31 735 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 ZNF605Q86T29 641 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 XYLT1Q86Y38 959 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 MARCH9Q86YJ5 346 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PASD1Q8IV76 773 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 MREGQ8N565 214 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 USP33Q8TEY7 942 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 KRT35Q92764 455 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 RBM41Q96IZ5 413 aaKnown RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 HSFY1Q96LI6 401 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 HEXIM2Q96MH2 286 aaKnown RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 FUT8Q9BYC5 575 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 FRMD8P1Q9BZ68 369 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 RAB17Q9H0T7 212 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 ACBD3Q9H3P7 528 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 DUS2Q9NX74 493 aaKnown RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 HESX1Q9UBX0 185 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 DMGDHQ9UI17 866 aaKnown RBP11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PILRBQ9UKJ0 227 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 WNT6Q9Y6F9 365 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 PLXNB3Q9ULL4 1909 aa11.27□□□□□ -0.61
MRPS28-208ENST00000521605 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 M0QZQ0 153 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 ALDH1A2O94788 518 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 KRT7P08729 469 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 PYGMP11217 842 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 KRT3P12035 628 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 ACADSBP45954 432 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 IFNAR2P48551 515 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 LHX1P48742 406 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 BCAT1P54687 386 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 CYP4F3Q08477 520 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 HNRNPDQ14103 355 aaKnown RBP11.26□□□□□ -0.61
MRPS28-208ENST00000521605 DUOXA1Q1HG43 343 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 SLC39A12Q504Y0 691 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 SPDYCQ5MJ68 293 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 DRICH1Q6PGQ1 229 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-208ENST00000521605 DCUN1D2Q6PH85 259 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 RCOR2Q8IZ40 523 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 STKLD1Q8NE28 680 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 SLC35F5Q8WV83 523 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 KBTBD7Q8WVZ9 684 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 KRT12Q99456 494 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 OXCT2Q9BYC2 517 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-208ENST00000521605 UBXN6Q9BZV1 441 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 ZDHHC4Q9NPG8 344 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 FAM114A2Q9NRY5 505 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 TSPAN16Q9UKR8 245 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 MMP17Q9ULZ9 603 aa11.26□□□□□ -0.61
MRPS28-208ENST00000521605 APC2O95996 2303 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 K7EQS6 105 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 M0QYV0 167 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 ARHGAP33O14559 1287 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 RAD51CO43502 376 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 HEXIM1O94992 359 aaKnown RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 CALCAP01258 141 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 CYP11A1P05108 521 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 SERPINF2P08697 491 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 GNL1P36915 607 aaPredicted RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 RPL6Q02878 288 aaKnown RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 BST2Q10589 180 aaKnown RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 GPS2Q13227 327 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 KLF1Q13351 362 aaPredicted RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 SIX1Q15475 284 aaPredicted RBP11.25□□□□□ -0.61
MRPS28-208ENST00000521605 TAZQ16635 292 aa11.25□□□□□ -0.61
MRPS28-208ENST00000521605 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms