RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 TRIP11Q15643 1979 aa11.64□□□□□ -0.55
CLK4-206ENST00000520878 FAM237BA0A1B0GVD1 139 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 TPP1O14773 563 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 SKIP12755 728 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 SERPINB9P50453 376 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 DCLRE1AQ6PJP8 1040 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 PSTKQ8IV42 348 aaKnown RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 TRIM42Q8IWZ5 723 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 GPATCH11Q8N954 259 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 SGF29Q96ES7 293 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 SIGLEC10Q96LC7 697 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 RPRD1AQ96P16 312 aaPredicted RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 FICDQ9BVA6 458 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 LRRC40Q9H9A6 602 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 GRID1Q9ULK0 1009 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 PCDHA11Q9Y5I1 949 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 TRDMT1O14717 391 aaKnown RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 MT-CYBP00156 380 aaPredicted RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 SERPINB3P29508 390 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 MAXP61244 160 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 MGAT5Q09328 741 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 NXNQ6DKJ4 435 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 BANPQ8N9N5 519 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 PTPRN2Q92932 1015 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 CAB39LQ9H9S4 337 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 CYLDQ9NQC7 956 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 FBXO6Q9NRD1 293 aaPredicted RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 CHRAC1Q9NRG0 131 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 LCTP09848 1927 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 SLC12A8A0AV02 714 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 E7ESA3 106 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 DIAPH2O60879 1101 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 ALDH2P05091 517 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 ENO1P06733 434 aaKnown RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 NQO1P15559 274 aaKnown RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 PTPN3P26045 913 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 BST1Q10588 318 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 USP10Q14694 798 aaKnown RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 CRYMQ14894 314 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 DEFB115Q30KQ5 88 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 RYBPQ8N488 228 aaPredicted RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLK4-206ENST00000520878 DBF4BQ8NFT6 615 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 LRRC39Q96DD0 335 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 ZNF512Q96ME7 567 aaPredicted RBP11.63□□□□□ -0.55
CLK4-206ENST00000520878 TMEM120AQ9BXJ8 343 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 CATSPERBQ9H7T0 1116 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 NT5MQ9NPB1 228 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 DNAJB4Q9UDY4 337 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 PAPPA2Q9BXP8 1791 aa11.63□□□□□ -0.55
CLK4-206ENST00000520878 GYG2O15488 501 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 KCTD13Q8WZ19 329 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 FAM136AQ96C01 138 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 RAB3IPQ96QF0 476 aaPredicted RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 HMX1Q9NP08 348 aaPredicted RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 ABCC13Q9NSE7 274 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 GABRDO14764 452 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 TYROBPO43914 113 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 HSPA4LO95757 839 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 PGAM1P18669 254 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 SPRP35270 261 aaPredicted RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 GATMP50440 423 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 NOGQ13253 232 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 TNFAIP8L3Q5GJ75 292 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 SLC24A5Q71RS6 500 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 WDR75Q8IWA0 830 aaKnown RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 CCNYL1Q8N7R7 359 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 MCUQ8NE86 351 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 PDCD6IPQ8WUM4 868 aaKnown RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 CENPIQ92674 756 aaPredicted RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 CCDC134Q9H6E4 229 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 STARD13Q9Y3M8 1113 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 SBF1O95248 1867 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 TBKBP1A7MCY6 615 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 VAPBO95292 243 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 AQP5P55064 265 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 FASTKD1Q53R41 847 aaKnown RBP11.62□□□□□ -0.55
CLK4-206ENST00000520878 NAPEPLDQ6IQ20 393 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 ARHGAP36Q6ZRI8 547 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 LONP2Q86WA8 852 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 CERS2Q96G23 380 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 L3MBTL1Q9Y468 752 aa11.62□□□□□ -0.55
CLK4-206ENST00000520878 C9IYK1 514 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 IRF1P10914 325 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 CCNB1P14635 433 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TPSB2P20231 275 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 PGGT1BP53609 377 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TBX4P57082 545 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 SEMA5AQ13591 1074 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TPSAB1Q15661 275 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 NFE2Q16621 373 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms