RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ATP6V0D2Q8N8Y2 350 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 GANCQ8TET4 914 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 SERGEFQ9UGK8 458 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 APOBEC2Q9Y235 224 aaKnown RBP20.31■□□□□ 0.84
PABPC1-215ENST00000520804 ANKRD6Q9Y2G4 727 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 ITIH6Q6UXX5 1313 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 SRRM3A6NNA2 597 aaPredicted RBP20.3■□□□□ 0.84
PABPC1-215ENST00000520804 TTC34A8MYJ7 566 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 KCNU1A8MYU2 1149 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 F5H5T6 163 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 MID1O15344 667 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 FLRT2O43155 660 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 IGHV4-34P06331 123 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 GLI1P08151 1106 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 ECT2LQ008S8 904 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 APBA1Q02410 837 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 SFSWAPQ12872 951 aaKnown RBP20.3■□□□□ 0.84
PABPC1-215ENST00000520804 BAHD1Q8TBE0 780 aaPredicted RBP20.3■□□□□ 0.84
PABPC1-215ENST00000520804 SHC3Q92529 594 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 SLC2A13Q96QE2 648 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 CPXM1Q96SM3 734 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 PRMT1Q99873 361 aaKnown RBP20.3■□□□□ 0.84
PABPC1-215ENST00000520804 SLC12A6Q9UHW9 1150 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 SLCO3A1Q9UIG8 710 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 CEP83Q9Y592 693 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 IGF2RP11717 2491 aa20.3■□□□□ 0.84
PABPC1-215ENST00000520804 EDDM13A0A1B0GTR0 161 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 A0A1W2PP55 124 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 GTPBP10A4D1E9 387 aaKnown RBP20.29■□□□□ 0.84
PABPC1-215ENST00000520804 GALCP54803 685 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 CDK17Q00537 523 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 SLC12A1Q13621 1099 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 SUZ12Q15022 739 aaKnown RBP20.29■□□□□ 0.84
PABPC1-215ENST00000520804 CAMK4Q16566 473 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 EXOC3L4Q17RC7 722 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 RNF219Q5W0B1 726 aaPredicted RBP20.29■□□□□ 0.84
PABPC1-215ENST00000520804 SMYD5Q6GMV2 418 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 LAYNQ6UX15 382 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 SLCO6A1Q86UG4 719 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 IRF2BP1Q8IU81 584 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 MMAAQ8IVH4 418 aaKnown RBP20.29■□□□□ 0.84
PABPC1-215ENST00000520804 DEFB106AQ8N104 65 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 PPP1R13BQ96KQ4 1090 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 FAM129BQ96TA1 746 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 NEUROG2Q9H2A3 272 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 FAM204AQ9H8W3 233 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 ASNSD1Q9NWL6 643 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 ADAMTS1Q9UHI8 967 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 PCDHGC3Q9UN70 934 aa20.29■□□□□ 0.84
PABPC1-215ENST00000520804 TMEM131Q92545 1883 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 FAM47DPA6NHR8 397 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 SLC2A3P11169 496 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 PON1P27169 355 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 SLC8A1P32418 973 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 UBE2HP62256 183 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 EFHC1Q5JVL4 640 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 TTC39BQ5VTQ0 682 aaPredicted RBP20.28■□□□□ 0.84
PABPC1-215ENST00000520804 PASD1Q8IV76 773 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 CCAR2Q8N163 923 aaKnown RBP20.28■□□□□ 0.84
PABPC1-215ENST00000520804 RHBDD1Q8TEB9 315 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 PTPRN2Q92932 1015 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 IGSF8Q969P0 613 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 RPL10LQ96L21 214 aaKnown RBP20.28■□□□□ 0.84
PABPC1-215ENST00000520804 CDC6Q99741 560 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 OMDQ99983 421 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 DDIT4Q9NX09 232 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 FZD4Q9ULV1 537 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 SPEGQ15772 3267 aa20.28■□□□□ 0.84
PABPC1-215ENST00000520804 NYNRINQ9P2P1 1898 aaKnown RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 A0A1W2PPC4 97 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 KCNK3O14649 394 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 HSF2BPO75031 334 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 RNASEH2AO75792 299 aaKnown RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 CAPNS1P04632 268 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 ABCB4P21439 1286 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 CCR1P32246 355 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 CTSKP43235 329 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 STK19P49842 368 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 RACK1P63244 317 aaKnown RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 KCNT1Q5JUK3 1230 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 NCEH1Q6PIU2 408 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 ADAT2Q7Z6V5 191 aaKnown RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 CIR1Q86X95 450 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 OR2T34Q8NGX1 318 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 TOR4AQ9NXH8 423 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 AJAP1Q9UKB5 411 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 RALYQ9UKM9 306 aaKnown RBP20.27■□□□□ 0.84
PABPC1-215ENST00000520804 BTBD3Q9Y2F9 522 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 CHD6Q8TD26 2715 aa20.27■□□□□ 0.84
PABPC1-215ENST00000520804 PLXNA2O75051 1894 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 SYNJ2BP-COX16A0A087WUM0 186 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 A0A1B0GVM2 712 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 TCAF2A6NFQ2 919 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 LRRC72A6NJI9 287 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 C10orf142B7Z368 130 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 H0Y8X5 98 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 VILLO15195 856 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 GRAP2O75791 330 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 PDGFRAP16234 1089 aa20.26■□□□□ 0.83
PABPC1-215ENST00000520804 C5AR1P21730 350 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms