RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 IGLV3-19P01714 112 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SRPRAP08240 638 aaKnown RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 STK19P49842 368 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SHC2P98077 582 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLC6A3Q01959 620 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 DRAP1Q14919 205 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 CST6Q15828 149 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 HNRNPA1L2Q32P51 320 aaKnown RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 PTPN20Q4JDL3 420 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 TTC39BQ5VTQ0 682 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 TMEM35BQ8NCS4 154 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 DNASE2BQ8WZ79 361 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SLC2A13Q96QE2 648 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SCNM1Q9BWG6 230 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 PABPC3Q9H361 631 aaKnown RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SGK2Q9HBY8 427 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 DNAAF2Q9NVR5 837 aaKnown RBP16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 ASNSD1Q9NWL6 643 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
IGHV3-42-201ENST00000520410 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 A0A1B0GVM2 712 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 TCAF2A6NFQ2 919 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 GOLGA8SH3BPF8 625 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 KRT37O76014 449 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 IL1BP01584 269 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 CLCN1P35523 988 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 AFF3P51826 1226 aaKnown RBP16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 C21orf59P57076 290 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 ZNF177Q13360 481 aaPredicted RBP16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 IL27RAQ6UWB1 636 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 OLFML1Q6UWY5 402 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 LAYNQ6UX15 382 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 STK40Q8N2I9 435 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 BIRC7Q96CA5 298 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 MRGPRX3Q96LB0 322 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 ADAM33Q9BZ11 813 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 MUC3BQ9H195 1237 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 PCED1AQ9H1Q7 454 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 RSPH9Q9H1X1 276 aaPredicted RBP16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 IL21RQ9HBE5 538 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 VPS28Q9UK41 221 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 SCML1Q9UN30 329 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 NFE2L3Q9Y4A8 694 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 CKAP5Q14008 2032 aa16.65■□□□□ 0.26
IGHV3-42-201ENST00000520410 LRRC72A6NJI9 287 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 GOLGA8CPA6NN73 597 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 C1QTNF9BB2RNN3 333 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 IGLV3-25P01717 112 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 C1QTNF9P0C862 333 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 CD59P13987 128 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 ZNF18P17022 549 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 SLC8A1P32418 973 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 NOS2P35228 1153 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 OXCT1P55809 520 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 FAM193AP78312 1265 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 DEUP1Q05D60 604 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 TRIP6Q15654 476 aaKnown RBP16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 HLA-BQ31612 363 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 FKBP15Q5T1M5 1219 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 KIAA0895LQ68EN5 471 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 FBXL22Q6P050 247 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 UNQ6494/PRO21346Q6UXR6 183 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 PIP4P1Q86T03 277 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 ERICH1Q86X53 443 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 MYO19Q96H55 970 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 VPS16Q9H269 839 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 TM9SF3Q9HD45 589 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 AASDHPPTQ9NRN7 309 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 TM7SF3Q9NS93 570 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 SLCO3A1Q9UIG8 710 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 PCDH15Q96QU1 1955 aa16.64■□□□□ 0.25
IGHV3-42-201ENST00000520410 SPTBN2O15020 2390 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 TARSL2A2RTX5 802 aaKnown RBP16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 PAGE1O75459 146 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 CYP11B1P15538 503 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 SULT2A1Q06520 285 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 SLC14A1Q13336 389 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 SLC12A1Q13621 1099 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 AUHQ13825 339 aaKnown RBP16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 HNRNPDQ14103 355 aaKnown RBP16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 C2CD6Q53TS8 623 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 CCDC157Q569K6 752 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 TCP11X2Q5H9J9 407 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 KLHDC7AQ5VTJ3 777 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 SLC26A9Q7LBE3 791 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 ZDHHC17Q8IUH5 632 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 FAM71AQ8IYT1 594 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 OR14C36Q8NHC7 312 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 IGSF8Q969P0 613 aa16.63■□□□□ 0.25
IGHV3-42-201ENST00000520410 C18orf8Q96DM3 657 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms