RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 OVOS1Q6IE37 1185 aa26.38■■□□□ 1.81
COL13A1-213ENST00000520267 MAGEC3Q8TD91 643 aa26.38■■□□□ 1.81
COL13A1-213ENST00000520267 RNF34Q969K3 372 aa26.38■■□□□ 1.81
COL13A1-213ENST00000520267 SLC7A6OSQ96CW6 309 aaPredicted RBP26.38■■□□□ 1.81
COL13A1-213ENST00000520267 FCRL3Q96P31 734 aaPredicted RBP26.38■■□□□ 1.81
COL13A1-213ENST00000520267 TRMT13Q9NUP7 481 aaKnown RBP26.38■■□□□ 1.81
COL13A1-213ENST00000520267 ALDOAP04075 364 aaKnown RBP26.37■■□□□ 1.81
COL13A1-213ENST00000520267 ERVK-10P10266 1014 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 CHI3L2Q15782 390 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 CTC1Q2NKJ3 1217 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 DSEQ9UL01 958 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 RPS6KL1Q9Y6S9 549 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 C2orf71A6NGG8 1288 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 POLBP06746 335 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 MX2P20592 715 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 TM4SF4P48230 202 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 TMPRSS15P98073 1019 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 CAP1Q01518 475 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 RASSF3Q86WH2 238 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 NUDCD3Q8IVD9 361 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 TRIM42Q8IWZ5 723 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 MLPHQ9BV36 600 aaPredicted RBP26.37■■□□□ 1.81
COL13A1-213ENST00000520267 BRD8Q9H0E9 1235 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 ZNF395Q9H8N7 513 aaPredicted RBP26.37■■□□□ 1.81
COL13A1-213ENST00000520267 MTO1Q9Y2Z2 717 aaKnown RBP26.37■■□□□ 1.81
COL13A1-213ENST00000520267 PATJQ8NI35 1801 aa26.37■■□□□ 1.81
COL13A1-213ENST00000520267 TPP1O14773 563 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 KCTD11Q693B1 232 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 SCML4Q8N228 414 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 CELF6Q96J87 481 aaKnown RBP26.36■■□□□ 1.81
COL13A1-213ENST00000520267 GBA3Q9H227 469 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 FAM237BA0A1B0GVD1 139 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 ZNF189O75820 626 aaPredicted RBP26.36■■□□□ 1.81
COL13A1-213ENST00000520267 BPGMP07738 259 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 NAB1Q13506 487 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 SPANXN3Q5MJ09 141 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 DCLRE1AQ6PJP8 1040 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 INPP5DQ92835 1189 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 CERS2Q96G23 380 aa26.36■■□□□ 1.81
COL13A1-213ENST00000520267 NFKB1P19838 968 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 SERPINB6P35237 376 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 TRIM71Q2Q1W2 868 aaKnown RBP26.35■■□□□ 1.81
COL13A1-213ENST00000520267 TEX44Q53QW1 395 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 ATG16L1Q676U5 607 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 C7orf26Q96N11 449 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 CASS4Q9NQ75 786 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 SERPINB3P29508 390 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 ZNF135P52742 658 aaPredicted RBP26.35■■□□□ 1.81
COL13A1-213ENST00000520267 IRX4P78413 519 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 SWT1Q5T5J6 900 aaKnown RBP26.35■■□□□ 1.81
COL13A1-213ENST00000520267 C16orf46Q6P387 395 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 THEM5Q8N1Q8 247 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 SKA1Q96BD8 255 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 PRR11Q96HE9 360 aaPredicted RBP26.35■■□□□ 1.81
COL13A1-213ENST00000520267 SUSD3Q96L08 255 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 RAB3IPQ96QF0 476 aaPredicted RBP26.35■■□□□ 1.81
COL13A1-213ENST00000520267 FBXO6Q9NRD1 293 aaPredicted RBP26.35■■□□□ 1.81
COL13A1-213ENST00000520267 ZFATQ9P243 1243 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 TRHDEQ9UKU6 1024 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 VANGL2Q9ULK5 521 aa26.35■■□□□ 1.81
COL13A1-213ENST00000520267 MTSS1O43312 755 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 IGLV3-25P01717 112 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 ITGA2BP08514 1039 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 SRGAP2BP0DMP2 458 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 MYL2P10916 166 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 OCRLQ01968 901 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 PDE1CQ14123 709 aaPredicted RBP26.34■■□□□ 1.81
COL13A1-213ENST00000520267 ZNF598Q86UK7 904 aaKnown RBP26.34■■□□□ 1.81
COL13A1-213ENST00000520267 DNAAF3Q8N9W5 541 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 ACMSDQ8TDX5 336 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 UROC1Q96N76 676 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 LRRC40Q9H9A6 602 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 SAR1AQ9NR31 198 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 EMCNQ9ULC0 261 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 NOD1Q9Y239 953 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 TLL2Q9Y6L7 1015 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 ELNP15502 786 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 PGFP49763 221 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 EIF4EBP2Q13542 120 aaPredicted RBP26.34■■□□□ 1.81
COL13A1-213ENST00000520267 ZSCAN18Q8TBC5 510 aaPredicted RBP26.34■■□□□ 1.81
COL13A1-213ENST00000520267 DPF3Q92784 378 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 ZNF669Q96BR6 464 aaPredicted RBP26.34■■□□□ 1.81
COL13A1-213ENST00000520267 TBC1D31Q96DN5 1066 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 SIK2Q9H0K1 926 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 OSBPL2Q9H1P3 480 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 NEU3Q9UQ49 428 aa26.34■■□□□ 1.81
COL13A1-213ENST00000520267 BIRC5O15392 142 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 GSRP00390 522 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 JCHAINP01591 159 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 PRKAR2AP13861 404 aaKnown RBP26.33■■□□□ 1.81
COL13A1-213ENST00000520267 CEP57Q86XR8 500 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 APOL2Q9BQE5 337 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 C20orf27Q9GZN8 174 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 BFARQ9NZS9 450 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 CEP350Q5VT06 3117 aa26.33■■□□□ 1.81
COL13A1-213ENST00000520267 B4GALT3O60512 393 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 DNAJC6O75061 913 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 HAUS5O94927 633 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 TSPY1Q01534 308 aa26.32■■□□□ 1.8
COL13A1-213ENST00000520267 ITGA7Q13683 1181 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms