RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SLC30A5Q8TAD4 765 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 FAM129BQ96TA1 746 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 TBCBQ99426 244 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 NUP58Q9BVL2 599 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 GPR174Q9BXC1 333 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 SIK2Q9H0K1 926 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 SYNCQ9H7C4 482 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 TMPRSS4Q9NRS4 437 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 PIGVQ9NUD9 493 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 ARHGEF38Q9NXL2 777 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 RRN3Q9NYV6 651 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 ERVW-1Q9UQF0 538 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 HS3ST4Q9Y661 456 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 LNP1A1A4G5 178 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 TTC34A8MYJ7 566 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 F5H5T6 163 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 NRDCO43847 1150 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 LSM8O95777 96 aaKnown RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 F9P00740 461 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 ASLP04424 464 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 UNGP13051 313 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 MMP8P22894 467 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 OXTRP30559 389 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 FLT3P36888 993 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 RPS14P62263 151 aaKnown RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 ECT2LQ008S8 904 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 DEUP1Q05D60 604 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 PTP4A2Q12974 167 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 SLC12A1Q13621 1099 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 ARID5BQ14865 1188 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 DUOXA1Q1HG43 343 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 PLEKHG6Q3KR16 790 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 SLC25A52Q3SY17 297 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 ANO6Q4KMQ2 910 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 RAB6CQ53S08 254 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 TRIM61Q5EBN2 209 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 C9orf64Q5T6V5 341 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 FAM102AQ5T9C2 384 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 IL31Q6EBC2 164 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 CXorf57Q6NSI4 855 aaKnown RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 IRF2BP2Q7Z5L9 587 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 CCDC117Q8IWD4 279 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 ZNF683Q8IZ20 524 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 KDM1BQ8NB78 822 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 CADM4Q8NFZ8 388 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 NEK11Q8NG66 645 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 DNASE2BQ8WZ79 361 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 PTPRN2Q92932 1015 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 RPL10LQ96L21 214 aaKnown RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 C1orf74Q96LT6 269 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 BPIFA3Q9BQP9 254 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 FUCA2Q9BTY2 467 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 NUSAP1Q9BXS6 441 aaKnown RBP9.64□□□□□ -0.87
HDAC3-215ENST00000519474 MAGEB5Q9BZ81 275 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 TKTL2Q9H0I9 626 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 RAB6CQ9H0N0 254 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 YY1AP1Q9H869 796 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 FAM204AQ9H8W3 233 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 FSCN3Q9NQT6 498 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 VANGL2Q9ULK5 521 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 DAAM1Q9Y4D1 1078 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 OR51B4Q9Y5P0 310 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 SNX10Q9Y5X0 201 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 CEP192Q8TEP8 1941 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 PLXND1Q9Y4D7 1925 aa9.64□□□□□ -0.87
HDAC3-215ENST00000519474 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-215ENST00000519474 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
HDAC3-215ENST00000519474 SMTNL1A8MU46 457 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 GOLGA8SH3BPF8 625 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 SIN3BO75182 1162 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 CNTN5O94779 1100 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 SRPRAP08240 638 aaKnown RBP9.63□□□□□ -0.87
HDAC3-215ENST00000519474 SERPINF2P08697 491 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 ACADMP11310 421 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 PDGFRAP16234 1089 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 ACSL1P33121 698 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 GGCXP38435 758 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 NUMBP49757 651 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 SULT1E1P49888 294 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 ST8SIA6P61647 398 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 MTA1Q13330 715 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 ZNF177Q13360 481 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-215ENST00000519474 CDH18Q13634 790 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 IQCB1Q15051 598 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 HNRNPA1L2Q32P51 320 aaKnown RBP9.63□□□□□ -0.87
HDAC3-215ENST00000519474 CCDC14Q49A88 953 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 ALFQ53S48 1182 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 BRMS1LQ5PSV4 323 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 SH3PXD2AQ5TCZ1 1133 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 CAVIN1Q6NZI2 390 aaKnown RBP9.63□□□□□ -0.87
HDAC3-215ENST00000519474 FAM124AQ86V42 546 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 RGL4Q8IZJ4 473 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 EMC1Q8N766 993 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 ANKRD20A12PQ8NF67 263 aa9.63□□□□□ -0.87
HDAC3-215ENST00000519474 C1orf216Q8TAB5 229 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms