RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ST6GAL1P15907 406 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 HOXB9P17482 250 aaPredicted RBP4.1□□□□□ -1.75
VPS13B-207ENST00000518569 KELP23276 732 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 PNPLA4P41247 253 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 CDK18Q07002 472 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 STIM1Q13586 685 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 SLC9C1Q4G0N8 1177 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 CTXN3Q4LDR2 81 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 LIPMQ5VYY2 423 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 CYP26C1Q6V0L0 522 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 YTHDF3Q7Z739 585 aaKnown RBP4.1□□□□□ -1.75
VPS13B-207ENST00000518569 C2CD5Q86YS7 1000 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 DDB2Q92466 427 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 RILPL2Q969X0 211 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 SIGLEC11Q96RL6 698 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 ZNF347Q96SE7 839 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 QTRT1Q9BXR0 403 aaKnown RBP4.1□□□□□ -1.75
VPS13B-207ENST00000518569 NRIP3Q9NQ35 241 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 KLHL13Q9P2N7 655 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 IPO11Q9UI26 975 aaKnown RBP4.1□□□□□ -1.75
VPS13B-207ENST00000518569 RCE1Q9Y256 329 aa4.1□□□□□ -1.75
VPS13B-207ENST00000518569 ZNF335Q9H4Z2 1342 aaPredicted RBP4.1□□□□□ -1.75
VPS13B-207ENST00000518569 SLC22A23A1A5C7 686 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 C2CD4BA6NLJ0 364 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 GRM8O00222 908 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 CNPP09543 421 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 CTSAP10619 480 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PRPH2P23942 346 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 OAZ1P54368 228 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 B4GALNT1Q00973 533 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PDCLQ13371 301 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 ALKBH1Q13686 389 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 THOC5Q13769 683 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 SEMA3AQ14563 771 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 ANKRD1Q15327 319 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 TRIP6Q15654 476 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 EZH2Q15910 746 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 SRSF7Q16629 238 aaKnown RBP eCLIP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 MORN5Q5VZ52 161 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PAPD7Q5XG87 772 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 KIAA1324Q6UXG2 1013 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 FAM57BQ71RH2 274 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 RTL10Q7L3V2 364 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 MDGA2Q7Z553 956 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 ARL14EPQ8N8R7 260 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PIGOQ8TEQ8 1089 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 CUL5Q93034 780 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PPP1R10Q96QC0 940 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 SH2D3AQ9BRG2 576 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 OSBPL5Q9H0X9 879 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PLEKHA2Q9HB19 425 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 MOV10Q9HCE1 1003 aaKnown RBP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.09□□□□□ -1.75
VPS13B-207ENST00000518569 DTX4Q9Y2E6 619 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 PKP3Q9Y446 797 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 ZNF804BA4D1E1 1349 aa4.09□□□□□ -1.75
VPS13B-207ENST00000518569 NPIPB13A6NJU9 1138 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 NPIPB5A8MRT5 1133 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 NPIPB4C9JG80 1138 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 PRPF4O43172 522 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 CNOT3O75175 753 aaKnown RBP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 ACP5P13686 325 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 PKMP14618 531 aaKnown RBP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 RXRAP19793 462 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 STAT1P42224 750 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 MRPS21P82921 87 aaKnown RBP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 ID2Q02363 134 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 SUPT20HL1Q3ZLR7 823 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 HSP90AB4PQ58FF6 505 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 ZNF484Q5JVG2 852 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 CBWD5Q5RIA9 395 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 C10orf76Q5T2E6 689 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 VWA5B1Q5TIE3 1220 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 DENND1BQ6P3S1 775 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 BBS12Q6ZW61 710 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM200AQ86VY9 491 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 CEP70Q8NHQ1 597 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 WIPF2Q8TF74 440 aaPredicted RBP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 UBE2Q2Q8WVN8 375 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 IGFBPL1Q8WX77 278 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 UBXN10Q96LJ8 280 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 COG8Q96MW5 612 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 TWNKQ96RR1 684 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 ARHGAP39Q9C0H5 1083 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 PAPOLBQ9NRJ5 636 aaKnown RBP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 PGAP2Q9UHJ9 254 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 TNFSF13BQ9Y275 285 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 BTBD3Q9Y2F9 522 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 DNAJC16Q9Y2G8 782 aa4.08□□□□□ -1.76
VPS13B-207ENST00000518569 RRP7AQ9Y3A4 280 aaKnown RBP4.08□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM247A6NEH6 219 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 KCNU1A8MYU2 1149 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 F8W810 466 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 EIF3FO00303 357 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-207ENST00000518569 CREB3O43889 395 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 CCNT1O60563 726 aaKnown RBP4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TLR2O60603 784 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 TSPAN3O60637 253 aa4.07□□□□□ -1.76
VPS13B-207ENST00000518569 HLA-DQA2P01906 255 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms