RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ZSCAN5CA6NGD5 496 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 DRGXA6NNA5 263 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 LEFTY2O00292 366 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 GFRA2O00451 464 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 SCAMP3O14828 347 aaKnown RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ABCB7O75027 752 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 TBX10O75333 385 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CNTN5O94779 1100 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 HEXIM1O94992 359 aaKnown RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 PRAMEF12O95522 483 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 RBP3P10745 1247 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 TCF3P15923 654 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 RHOQP17081 205 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 HOXB8P17481 243 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 SERPINB6P35237 376 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 AVPR1AP37288 418 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 SGSHP51688 502 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 TFF2Q03403 129 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 XRCC4Q13426 336 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 PTK6Q13882 451 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ZNF77Q15935 545 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ALFQ53S48 1182 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ADGRF1Q5T601 910 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 LRRC31Q6UY01 552 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CIR1Q86X95 450 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 DDX42Q86XP3 938 aaKnown RBP eCLIP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ARHGAP12Q8IWW6 846 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 TP53INP2Q8IXH6 220 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CCDC33Q8N5R6 958 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 RIN3Q8TB24 985 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 SH3RF2Q8TEC5 729 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 GRK7Q8WTQ7 553 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 USP13Q92995 863 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ZSWIM3Q96MP5 696 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 RPRD1AQ96P16 312 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-203ENST00000517921 TMEM121Q9BTD3 319 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 ZYG11BQ9C0D3 744 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 C10orf88Q9H8K7 445 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 NDFIP2Q9NV92 336 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 TMEM248Q9NWD8 314 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CLEC1BQ9P126 229 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CFAP97Q9P2B7 532 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 CCL26Q9Y258 94 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 NEU2Q9Y3R4 380 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 RAD54BQ9Y620 910 aa10.88□□□□□ -0.67
PABPC1-203ENST00000517921 UNC80Q8N2C7 3258 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 PRUNE2Q8WUY3 3088 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 BCLAF3A2AJT9 711 aaKnown RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 HACD1B0YJ81 288 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 H7C0C1 242 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 TRDMT1O14717 391 aaKnown RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 GAS8O95995 478 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 VAV1P15498 845 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 FSHRP23945 695 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 WEE1P30291 646 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 ATP5OP48047 213 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 GDF10P55107 478 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 LMNB2Q03252 620 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 DLX2Q07687 328 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 GALNT2Q10471 571 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 COL19A1Q14993 1142 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 PDK1Q15118 436 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 PRKD1Q15139 912 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 SLC45A4Q5BKX6 768 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 RABGAP1LQ5R372 815 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 AFMIDQ63HM1 303 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 SYDE1Q6ZW31 735 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 HTR3DQ70Z44 454 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 B4GALNT4Q76KP1 1039 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 BZW1Q7L1Q6 419 aaKnown RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 TFAP2DQ7Z6R9 452 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 CDKL3Q8IVW4 592 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 NPAS3Q8IXF0 933 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 GLIS1Q8NBF1 620 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 LRRN4Q8WUT4 740 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 SEC14L1Q92503 715 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 RUBCNQ92622 972 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 CELF6Q96J87 481 aaKnown RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 NOL6Q9H6R4 1146 aaKnown RBP10.87□□□□□ -0.67
PABPC1-203ENST00000517921 ZNF148Q9UQR1 794 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 ZNF510Q9Y2H8 683 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 SH3BP1Q9Y3L3 701 aa10.87□□□□□ -0.67
PABPC1-203ENST00000517921 TTC28Q96AY4 2481 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 E2F8A0AVK6 867 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ESYT3A0FGR9 886 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CFAP69A5D8W1 941 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 SGK1O00141 431 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 TNFRSF10AO00220 468 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 PPP1R12AO14974 1030 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 KRT14P02533 472 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ETS1P14921 441 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 RBL1P28749 1068 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 GARSP41250 739 aaKnown RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 MAPKAPK2P49137 400 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 VSNL1P62760 191 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 RPS24P62847 133 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms