RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SLC4A5Q9BY07 1137 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 IMPG2Q9BZV3 1241 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ABCC13Q9NSE7 274 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 FBXL12Q9NXK8 326 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 DKK4Q9UBT3 224 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 MAN1B1Q9UKM7 699 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 STRIP2Q9ULQ0 834 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ERVW-1Q9UQF0 538 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PCDHB9Q9Y5E1 797 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 OR51B4Q9Y5P0 310 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SNX10Q9Y5X0 201 aa8.58□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PLXNA2O75051 1894 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 A0A1W2PNU3 283 aaPredicted RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 A0A1W2PPC4 97 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 FAM170AA1A519 330 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 FAM47DPA6NHR8 397 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 KCNU1A8MYU2 1149 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 M0QYV0 167 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TRIM38O00635 465 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 VILLO15195 856 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PMM2O15305 246 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SLC16A3O15427 465 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RTN2O75298 545 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CER1O95813 267 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 LATS1O95835 1130 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 MT-CO1P00395 513 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CYBBP04839 570 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PAEPP09466 180 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SETSIPP0DME0 302 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 EPB41P11171 864 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 HARS2P49590 506 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CENPCQ03188 943 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 HNRNPDQ14103 355 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ARID5BQ14865 1188 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CST6Q15828 149 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RAB6CQ53S08 254 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SFMBT2Q5VUG0 894 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RAP1GAP2Q684P5 730 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CXorf57Q6NSI4 855 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TADA2BQ86TJ2 420 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 IRF2BP1Q8IU81 584 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 AHI1Q8N157 1196 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SLC25A45Q8N413 288 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CARNMT1Q8N4J0 409 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 EHBP1Q8NDI1 1231 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 WFIKKN2Q8TEU8 576 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 UCMAQ8WVF2 138 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 AZIN2Q96A70 460 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 FUBP1Q96AE4 644 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 IPO9Q96P70 1041 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 BTBD1Q9H0C5 482 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RAB6CQ9H0N0 254 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PCED1AQ9H1Q7 454 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TMPRSS4Q9NRS4 437 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ARMCX3Q9UH62 379 aaPredicted RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ADAMTS1Q9UHI8 967 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PCDHB4Q9Y5E5 795 aa8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SPENQ96T58 3664 aaKnown RBP8.57□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SPTA1P02549 2419 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ITIH6Q6UXX5 1313 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RELNP78509 3460 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 A0A087WV48 116 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 LY6G6EA0A0G2JKS1 128 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 E5RJQ4 531 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 K7ERQ8 282 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 FLRT2O43155 660 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TNFSF14O43557 240 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 LATO43561 262 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ZNF821O75541 412 aaPredicted RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 MOCS2O96007 188 aaPredicted RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 CTSLP07711 333 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PNMA6AP0CW24 399 aaPredicted RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ACADMP11310 421 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 POLR2EP19388 210 aaKnown RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TACR2P21452 398 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SLC8A1P32418 973 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 EIF2S3P41091 472 aaKnown RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 PSMD8P48556 350 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ACADVLP49748 655 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ADPRHP54922 357 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 STX17P56962 302 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 NXPH1P58417 271 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RACK1P63244 317 aaKnown RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 FKBP3Q00688 224 aaKnown RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ACAP1Q15027 740 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 POM121L1PQ3SYA9 428 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TPRG1LQ5T0D9 272 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 MPP7Q5T2T1 576 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ZNF776Q68DI1 518 aaPredicted RBP8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TMEM110Q86TL2 294 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 MFN1Q8IWA4 741 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 TRIM59Q8IWR1 403 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 ZNF683Q8IZ20 524 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 LGI2Q8N0V4 545 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 SIX6OS1Q8N1H7 587 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 RNF139Q8WU17 664 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 IRGQQ8WZA9 623 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 HSFY1Q96LI6 401 aa8.56□□□□□ -1.04
SCARNA20.3-201ENST00000516913 NOX5Q96PH1 765 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms