RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 IRS1P35568 1242 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CHKAP35790 457 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GARSP41250 739 aaKnown RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NDST2P52849 883 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CAMK1Q14012 370 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KCNJ11Q14654 390 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 UAP1Q16222 522 aaPredicted RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HIF1AQ16665 826 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ANKRD20A2Q5SQ80 823 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ARTNQ5T4W7 220 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ANKRD20A1Q5TYW2 823 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ANKRD20A3Q5VUR7 823 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ANKRD22Q5VYY1 191 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DENND2CQ68D51 928 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NADSYN1Q6IA69 706 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FBXL22Q6P050 247 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ELMSAN1Q6PJG2 1045 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LRIG3Q6UXM1 1119 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PPP1R21Q6ZMI0 780 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CENPUQ71F23 418 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TFAP2DQ7Z6R9 452 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NLRP14Q86W24 1093 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TMC8Q8IU68 726 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LRRC49Q8IUZ0 686 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DENND1CQ8IV53 801 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ARHGAP12Q8IWW6 846 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CCDC13Q8IYE1 715 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HS6ST3Q8IZP7 471 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LGI2Q8N0V4 545 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 IQCKQ8N0W5 287 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GOLGA6L1Q8N7Z2 621 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SLC22A17Q8WUG5 538 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 EXOC4Q96A65 974 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PWWP2AQ96N64 755 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RPRD1AQ96P16 312 aaPredicted RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ZIM3Q96PE6 472 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TSGA13Q96PP4 275 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RBM15Q96T37 977 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DDX50Q9BQ39 737 aaKnown RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KLF16Q9BXK1 252 aaPredicted RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LRRC3Q9BY71 257 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RNF38Q9H0F5 515 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ATXN3LQ9H3M9 355 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CDC42EP4Q9H3Q1 356 aaKnown RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MED4Q9NPJ6 270 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ASAH2Q9NR71 780 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GKN1Q9NS71 199 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TMEM248Q9NWD8 314 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SMPD4Q9NXE4 827 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 OGFRQ9NZT2 677 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MPP6Q9NZW5 540 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KLHL8Q9P2G9 620 aaPredicted RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DPP7Q9UHL4 492 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MSRAQ9UJ68 235 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PLAAQ9Y263 795 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 YBX2Q9Y2T7 364 aaKnown RBP7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MYO7AQ13402 2215 aa7.84□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TRAV19A0A0A6YYK7 116 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 GOLGA6L7A0A1B0GV03 622 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 A0A1W2PRU2 124 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TCRBV7S3A2A0A539 114 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 E7EVH7 732 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 GOLGA8MH3BSY2 632 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 AGPSO00116 658 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 KCNK1O00180 336 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 EIF3HO15372 352 aaKnown RBP eCLIP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RIPK2O43353 540 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CLASP2O75122 1294 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CNTN5O94779 1100 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TMEM63AO94886 807 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 METTL18O95568 372 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 LATS1O95835 1130 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 OLFM2O95897 454 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CKMP06732 381 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 APRTP07741 180 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 HNRNPA1P09651 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 EPCAMP16422 314 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PTPN2P17706 415 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PFKLP17858 780 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TPSB2P20231 275 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CCNCP24863 283 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PTPN3P26045 913 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CORO1AP31146 461 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 HOXA9P31269 272 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 FDFT1P37268 417 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PBX2P40425 430 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MAGEA4P43358 317 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MAGEA6P43360 314 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MAPKAPK2P49137 400 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 LMAN1P49257 510 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 IRAK1P51617 712 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 EIF3BP55884 814 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ARL4CP56559 192 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SMAD3P84022 425 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CYP4F8P98187 520 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 IFFO1Q0D2I5 559 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 WASHC5Q12768 1159 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SEMA5AQ13591 1074 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms