RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 ERICH1Q86X53 443 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 DHX40Q8IX18 779 aaKnown RBP20.18■□□□□ 0.82
DDR1-280ENST00000515881 ZCCHC9Q8N567 271 aaKnown RBP20.18■□□□□ 0.82
DDR1-280ENST00000515881 MINDY1Q8N5J2 469 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 EPS8L1Q8TE68 723 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 IGSF8Q969P0 613 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 CNTNAP3BQ96NU0 1288 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 RPRD1AQ96P16 312 aaPredicted RBP20.18■□□□□ 0.82
DDR1-280ENST00000515881 NPY6RQ99463 290 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 CNTNAP3Q9BZ76 1288 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 MIR1-1HGQ9H1L0 117 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 ANO10Q9NW15 660 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.18■□□□□ 0.82
DDR1-280ENST00000515881 STAP1Q9ULZ2 295 aa20.18■□□□□ 0.82
DDR1-280ENST00000515881 A0A1B0GTW7 788 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 TTC34A8MYJ7 566 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 PAGE1O75459 146 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 MMEP08473 750 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 PDGFRAP16234 1089 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 TFE3P19532 575 aaPredicted RBP20.17■□□□□ 0.82
DDR1-280ENST00000515881 ACSL1P33121 698 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 OXCT1P55809 520 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 CENPCQ03188 943 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 SEMA3BQ13214 749 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 STX1AQ16623 288 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 FAM102AQ5T9C2 384 aaPredicted RBP20.17■□□□□ 0.82
DDR1-280ENST00000515881 RNF219Q5W0B1 726 aaPredicted RBP20.17■□□□□ 0.82
DDR1-280ENST00000515881 CXorf57Q6NSI4 855 aaKnown RBP20.17■□□□□ 0.82
DDR1-280ENST00000515881 XYLT1Q86Y38 959 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 HDDC3Q8N4P3 179 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 DEFB124Q8NES8 71 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 OR2I1PQ8NGU4 316 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 NT5C3BQ969T7 300 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 ADAM33Q9BZ11 813 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 BTBD1Q9H0C5 482 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 FAM207AQ9NSI2 230 aaPredicted RBP20.17■□□□□ 0.82
DDR1-280ENST00000515881 PIGVQ9NUD9 493 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 SLCO3A1Q9UIG8 710 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 VANGL2Q9ULK5 521 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 HS3ST4Q9Y661 456 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 ITIH6Q6UXX5 1313 aa20.17■□□□□ 0.82
DDR1-280ENST00000515881 FAM170AA1A519 330 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 TARSL2A2RTX5 802 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 UPK3BL1B0FP48 263 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 UPK3BL2E5RIL1 263 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 OPHN1O60890 802 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 RNASEH1O60930 286 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 SEMA4FO95754 770 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 MZF1P28698 734 aaPredicted RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 GGCXP38435 758 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 CXCR3P49682 368 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 SULT1E1P49888 294 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 IRAK1P51617 712 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 PLK1P53350 603 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 POLR2FP61218 127 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 NOMO3P69849 1222 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 MYL5Q02045 173 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 ZNF252P-AS1Q0IIN9 211 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 BRMS1LQ5PSV4 323 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 C9orf64Q5T6V5 341 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 MSANTD4Q8NCY6 345 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 PGAP3Q96FM1 320 aaPredicted RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 PABPC3Q9H361 631 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 C6orf106Q9H6K1 298 aaPredicted RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 DNAAF2Q9NVR5 837 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 EIF2B4Q9UI10 523 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 NOCTQ9UK39 431 aaKnown RBP20.16■□□□□ 0.82
DDR1-280ENST00000515881 ANGPTL2Q9UKU9 493 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 SCML1Q9UN30 329 aa20.16■□□□□ 0.82
DDR1-280ENST00000515881 EDDM13A0A1B0GTR0 161 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 EPHB6O15197 1021 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 BCAT2O15382 392 aaPredicted RBP20.15■□□□□ 0.82
DDR1-280ENST00000515881 GFPT2O94808 682 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 ADCY5O95622 1261 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 STK19P49842 368 aaPredicted RBP20.15■□□□□ 0.82
DDR1-280ENST00000515881 COPB1P53618 953 aaKnown RBP20.15■□□□□ 0.82
DDR1-280ENST00000515881 SULT2A1Q06520 285 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 GRIK2Q13002 908 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SLC25A52Q3SY17 297 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 C2CD6Q53TS8 623 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 NAA35Q5VZE5 725 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 USP30Q70CQ3 517 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SND1Q7KZF4 910 aaKnown RBP eCLIP20.15■□□□□ 0.82
DDR1-280ENST00000515881 PIP4P1Q86T03 277 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 ZNF677Q86XU0 584 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SLC20A1Q8WUM9 679 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 CPA5Q8WXQ8 436 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SNX19Q92543 992 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 RPL10LQ96L21 214 aaKnown RBP20.15■□□□□ 0.82
DDR1-280ENST00000515881 TBCBQ99426 244 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 ZDHHC5Q9C0B5 715 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 TKTL2Q9H0I9 626 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SIK2Q9H0K1 926 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SLC32A1Q9H598 525 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 WDCPQ9H6R7 721 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SGK2Q9HBY8 427 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 ANLNQ9NQW6 1124 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 ARHGEF38Q9NXL2 777 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 SIK3Q9Y2K2 1263 aa20.15■□□□□ 0.82
DDR1-280ENST00000515881 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms