RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 TBC1D3DA0A087WVF3 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3IA0A087WXS9 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3EA0A087X179 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3KA0A087X1G2 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3FA6NER0 549 aaPredicted RBP13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3LB9A6J9 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 ACSL4O60488 711 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 SDC3O75056 442 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 ASLP04424 464 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 MPOP05164 745 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3HP0C7X1 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 GIMD1P0DJR0 217 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 PSMD8P48556 350 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 ST8SIA6P61647 398 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 RPS24P62847 133 aaKnown RBP13.56□□□□□ -0.24
SMAD5-209ENST00000514777 E2F1Q01094 437 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
SMAD5-209ENST00000514777 GOLGA7BQ2TAP0 167 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 RESP18Q5W5W9 173 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3GQ6DHY5 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3CQ6IPX1 549 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 NAPEPLDQ6IQ20 393 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 MFN1Q8IWA4 741 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TBC1D3Q8IZP1 549 aaPredicted RBP13.56□□□□□ -0.24
SMAD5-209ENST00000514777 OXR1Q8N573 874 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 UBA3Q8TBC4 463 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 AZIN2Q96A70 460 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 ZNF578Q96N58 590 aaPredicted RBP13.56□□□□□ -0.24
SMAD5-209ENST00000514777 LRRC4Q9HBW1 653 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 TSPAN16Q9UKR8 245 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 PCDHA7Q9UN72 937 aa13.56□□□□□ -0.24
SMAD5-209ENST00000514777 HECTD1Q9ULT8 2610 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 IRAK2O43187 625 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 SRPRAP08240 638 aaKnown RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 C5AR1P21730 350 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 PCBP4P57723 403 aaKnown RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 TMPRSS3P57727 454 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 DAOAP59103 153 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 ENPEPQ07075 957 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 NFIL3Q16649 462 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 SLC45A4Q5BKX6 768 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 PITRM1Q5JRX3 1037 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 INTS8Q75QN2 995 aaKnown RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 IQCHQ86VS3 1027 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 APCDD1Q8J025 514 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 CFAP52Q8N1V2 620 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 SCML4Q8N228 414 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 CARNMT1Q8N4J0 409 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 SNRNP27Q8WVK2 155 aaKnown RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 KCTD13Q8WZ19 329 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
SMAD5-209ENST00000514777 DNAI2Q9GZS0 605 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 CLMPQ9H6B4 373 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 CYTH4Q9UIA0 394 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 CA5BQ9Y2D0 317 aa13.55□□□□□ -0.24
SMAD5-209ENST00000514777 CALUO43852 315 aaPredicted RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 DXOO77932 396 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 ADH1BP00325 375 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 KRT10P13645 584 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 C6P13671 934 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 LCP1P13796 627 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 VAV1P15498 845 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 DGKAP23743 735 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 NR2F2P24468 414 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 MZF1P28698 734 aaPredicted RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 MAT2AP31153 395 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 SLC11A2P49281 568 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 STK19P49842 368 aaPredicted RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 SLC8A3P57103 927 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 BST2Q10589 180 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 KRT39Q6A163 491 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 UNC45BQ8IWX7 931 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 EEF2KMTQ96G04 330 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 FCRL2Q96LA5 508 aaPredicted RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 IPO9Q96P70 1041 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 CNGB3Q9NQW8 809 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 UCKL1Q9NWZ5 548 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
SMAD5-209ENST00000514777 TPX2Q9ULW0 747 aaKnown RBP13.54□□□□□ -0.24
SMAD5-209ENST00000514777 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
SMAD5-209ENST00000514777 LY6G6EA0A0G2JKS1 128 aa13.53□□□□□ -0.24
SMAD5-209ENST00000514777 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
SMAD5-209ENST00000514777 PIK3R2O00459 728 aa13.53□□□□□ -0.24
SMAD5-209ENST00000514777 ARHGAP6O43182 974 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms