RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
SNHG4-208ENST00000514110 APCDD1Q8J025 514 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 GANCQ8TET4 914 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 EBF2Q9HAK2 575 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 KIAA1522Q9P206 1035 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-208ENST00000514110 SLCO3A1Q9UIG8 710 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 SCML1Q9UN30 329 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 NCKAP1Q9Y2A7 1128 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 PLXNA2O75051 1894 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 PLXNB3Q9ULL4 1909 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 A0A1W2PP55 124 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 TARSL2A2RTX5 802 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 BECN2A8MW95 431 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 H0Y8X5 98 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 RNASEH1O60930 286 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 APOEP02649 317 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 SRPRAP08240 638 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 ATXN1LP0C7T5 689 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 SLC9A1P19634 815 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 SLC8A1P32418 973 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 CTSKP43235 329 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 ECT2LQ008S8 904 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 PDCLQ13371 301 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 NCEH1Q6PIU2 408 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 TRIM65Q6PJ69 517 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 CIR1Q86X95 450 aaPredicted RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 PROSER1Q86XN7 944 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 WDTC1Q8N5D0 677 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 KDM1BQ8NB78 822 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 IGSF8Q969P0 613 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 BTN2A3PQ96KV6 586 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 MED15Q96RN5 788 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 FAM129BQ96TA1 746 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 PRMT1Q99873 361 aaKnown RBP12.62□□□□□ -0.39
SNHG4-208ENST00000514110 TRIM62Q9BVG3 475 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
SNHG4-208ENST00000514110 PTPRBP23467 1997 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 EDDM13A0A1B0GTR0 161 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 A0A1W2PPC4 97 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 C10orf142B7Z368 130 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 DKK1O94907 266 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 MOCS3O95396 460 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 VAV1P15498 845 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 MZF1P28698 734 aaPredicted RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 PSMD8P48556 350 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 STK19P49842 368 aaPredicted RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 IL9RQ01113 521 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 KCNJ12Q14500 433 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 SUZ12Q15022 739 aaKnown RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 ARHGAP44Q17R89 818 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 ENOSF1Q7L5Y1 443 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 ADAT2Q7Z6V5 191 aaKnown RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 MARCH9Q86YJ5 346 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 CREBRFQ8IUR6 639 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 AADATQ8N5Z0 425 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 PTPRN2Q92932 1015 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 SLC6A18Q96N87 628 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 CPXM1Q96SM3 734 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 CDC6Q99741 560 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 DSPP15924 2871 aaKnown RBP12.61□□□□□ -0.39
SNHG4-208ENST00000514110 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
SNHG4-208ENST00000514110 SYNJ2BP-COX16A0A087WUM0 186 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 F5H5T6 163 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 PCDHGA12O60330 932 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 GRAP2O75791 330 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
SNHG4-208ENST00000514110 WNT1P04628 370 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 PDGFRAP16234 1089 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 GOT1P17174 413 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 USP8P40818 1118 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 CCT8P50990 548 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 IRAK1P51617 712 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 RACK1P63244 317 aaKnown RBP12.6□□□□□ -0.39
SNHG4-208ENST00000514110 CAMK4Q16566 473 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 PRAMEF14Q5SWL7 426 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
SNHG4-208ENST00000514110 CXorf57Q6NSI4 855 aaKnown RBP12.6□□□□□ -0.39
SNHG4-208ENST00000514110 TMPRSS7Q7RTY8 843 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 PASD1Q8IV76 773 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 ATP6V0D2Q8N8Y2 350 aa12.6□□□□□ -0.39
SNHG4-208ENST00000514110 OR2T34Q8NGX1 318 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms