RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 RBM44Q6ZP01 1051 aaKnown RBP11.27□□□□□ -0.61
NFKB1-211ENST00000513803 AADATQ8N5Z0 425 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 IFI44Q8TCB0 444 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 MYO19Q96H55 970 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 PRR11Q96HE9 360 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-211ENST00000513803 PSMG3-AS1Q96PY0 264 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 FAM129BQ96TA1 746 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 DUSP16Q9BY84 665 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 IRX2Q9BZI1 471 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-211ENST00000513803 SLC25A18Q9H1K4 315 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 AGPAT3Q9NRZ7 376 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 NCKIPSDQ9NZQ3 722 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 CYTH4Q9UIA0 394 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 MAN2B2Q9Y2E5 1009 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 ENTPD2Q9Y5L3 495 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 CENPEQ02224 2701 aa11.27□□□□□ -0.61
NFKB1-211ENST00000513803 RP1L1Q8IWN7 2480 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-211ENST00000513803 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 SCAMP1O15126 338 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 EIF5BO60841 1220 aaKnown RBP11.26□□□□□ -0.61
NFKB1-211ENST00000513803 PIAS2O75928 621 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 LATS1O95835 1130 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 IL1BP01584 269 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 RPN1P04843 607 aaKnown RBP11.26□□□□□ -0.61
NFKB1-211ENST00000513803 ITGA2BP08514 1039 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 TGM2P21980 687 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 MAT2AP31153 395 aaKnown RBP11.26□□□□□ -0.61
NFKB1-211ENST00000513803 HOXD13P35453 343 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 CYP2J2P51589 502 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 YWHAGP61981 247 aaKnown RBP eCLIP11.26□□□□□ -0.61
NFKB1-211ENST00000513803 PPP2CBP62714 309 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 PPP2CAP67775 309 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 ZSCAN1Q8NBB4 408 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 TAF4BQ92750 862 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 LRRC4CQ9HCJ2 640 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 OLA1Q9NTK5 396 aaKnown RBP11.26□□□□□ -0.61
NFKB1-211ENST00000513803 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
NFKB1-211ENST00000513803 HBS1LQ9Y450 684 aaKnown RBP11.26□□□□□ -0.61
NFKB1-211ENST00000513803 CPED1A4D0V7 1026 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 TTC34A8MYJ7 566 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CLIC2O15247 247 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 EIF3DO15371 548 aaKnown RBP eCLIP11.25□□□□□ -0.61
NFKB1-211ENST00000513803 SLC7A4O43246 635 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 TBL1XO60907 577 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 TCEA3O75764 348 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CENPBP07199 599 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-211ENST00000513803 SRPRAP08240 638 aaKnown RBP11.25□□□□□ -0.61
NFKB1-211ENST00000513803 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CSKP41240 450 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CLEC18BQ6UXF7 455 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 C14orf80Q86SX3 495 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 TRIM69Q86WT6 500 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 MFN1Q8IWA4 741 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CCDC117Q8IWD4 279 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-211ENST00000513803 FAM26EQ8N5C1 309 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 FIBINQ8TAL6 211 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 ZNF507Q8TCN5 953 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 MRGPRX3Q96LB0 322 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 UBXN6Q9BZV1 441 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 GEMIN8Q9NWZ8 242 aaKnown RBP11.25□□□□□ -0.61
NFKB1-211ENST00000513803 KCNK4Q9NYG8 393 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 ERVW-1Q9UQF0 538 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 UBE4BO95155 1302 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 ICE1Q9Y2F5 2266 aa11.25□□□□□ -0.61
NFKB1-211ENST00000513803 RELNP78509 3460 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 CCDC187A0A096LP49 1063 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-211ENST00000513803 LY6G6EA0A0G2JKS1 128 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 K7ESM1 405 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 IRAK2O43187 625 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 TGFB1I1O43294 461 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 MOCS3O95396 460 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 C4BPAP04003 597 aaKnown RBP11.24□□□□□ -0.61
NFKB1-211ENST00000513803 NNMTP40261 264 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 FOXK1P85037 733 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 ZNF177Q13360 481 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-211ENST00000513803 ELAVL3Q14576 367 aaKnown RBP11.24□□□□□ -0.61
NFKB1-211ENST00000513803 TBR1Q16650 682 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 CDKN3Q16667 212 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 POM121L1PQ3SYA9 428 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-211ENST00000513803 ZCCHC8Q6NZY4 707 aaKnown RBP11.24□□□□□ -0.61
NFKB1-211ENST00000513803 STK40Q8N2I9 435 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 WDR48Q8TAF3 677 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 WFDC5Q8TCV5 224 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 RNF139Q8WU17 664 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 ARRDC3Q96B67 414 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 ELMO3Q96BJ8 720 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 LRRC27Q9C0I9 530 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 SEPT10Q9P0V9 454 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 CEP83Q9Y592 693 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 PCDHGA7Q9Y5G6 932 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 U3KQA8 63 aa11.24□□□□□ -0.61
NFKB1-211ENST00000513803 TDRD6O60522 2096 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms