RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 C4orf19Q8IY42 314 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 EMC1Q8N766 993 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 DNERQ8NFT8 737 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 HPS1Q92902 700 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 RMDN1Q96DB5 314 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 DEPDC7Q96QD5 511 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 CNPY3Q9BT09 278 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-211ENST00000513346 SLC25A23Q9BV35 468 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 TRPC7Q9HCX4 862 aa11.48□□□□□ -0.57
TCOF1-211ENST00000513346 A0A096LPK6 155 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 TRIM24O15164 1050 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 CHADO15335 359 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 NELFEP18615 380 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PNPLA4P41247 253 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ACADSBP45954 432 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SOX10P56693 466 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 JAM2P57087 298 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 HPCAP84074 193 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 DPYSQ14117 519 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 BROXQ5VW32 411 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 NAPEPLDQ6IQ20 393 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 KBTBD2Q8IY47 623 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 UBA3Q8TBC4 463 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ACMSDQ8TDX5 336 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 RBBP8Q99708 897 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SEPT5Q99719 369 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 AGO4Q9HCK5 861 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 NRXN3Q9Y4C0 1643 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 F8VP50 259 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PDHXO00330 501 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PRRG1O14668 218 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 RGS5O15539 181 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 KPNA6O60684 536 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 BPGMP07738 259 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 HMBSP08397 361 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 RARRES1P49788 294 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 MAMLD1Q13495 774 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 MGAT5BQ3V5L5 792 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ATP13A4Q4VNC1 1196 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ARMCX4Q5H9R4 360 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 C6orf52Q5T4I8 152 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 CHSY1Q86X52 802 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 FAM47BQ8NA70 645 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SARS2Q9NP81 518 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 GIN1Q9NXP7 522 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 TCRBV9S1A1TA0A576 114 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 TMEM150BA6NC51 233 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 MTSS1O43312 755 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PSME3P61289 254 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 CMPK2Q5EBM0 449 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ANGPTL8Q6UXH0 198 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ZBTB46Q86UZ6 589 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 TTC30AQ86WT1 665 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 RIC8BQ9NVN3 520 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SLC7A8Q9UHI5 535 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PLLPQ9Y342 182 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 COL14A1Q05707 1796 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ZNF862O60290 1169 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 CYBBP04839 570 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 HOXC6P09630 235 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 TGFB3P10600 412 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ATP6V1B2P21281 511 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 AVPR1AP37288 418 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 MAP3K7CLP57077 242 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 NAB1Q13506 487 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PGM5Q15124 567 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 CYP51A1Q16850 503 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SEPHS2Q99611 448 aa11.47□□□□□ -0.57
TCOF1-211ENST00000513346 SAE1Q9UBE0 346 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 LSM7Q9UK45 103 aaKnown RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 GPC6Q9Y625 555 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-211ENST00000513346 ROBO3Q96MS0 1386 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 ROBO1Q9Y6N7 1651 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 RGPD8O14715 1765 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-211ENST00000513346 LTN1O94822 1766 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 TMEM88BA6NKF7 163 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 H3BRB1 525 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 B3GAT3O94766 335 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 PIGNO95427 931 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 SLC18A1P54219 525 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 PPIL2Q13356 520 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 OR8H2Q8N162 312 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 MKL1Q969V6 931 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 REXO4Q9GZR2 422 aaKnown RBP11.46□□□□□ -0.57
TCOF1-211ENST00000513346 TUT1Q9H6E5 874 aaKnown RBP11.46□□□□□ -0.57
TCOF1-211ENST00000513346 CCDC167Q9P0B6 97 aa11.46□□□□□ -0.57
TCOF1-211ENST00000513346 PLA2G4CQ9UP65 541 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms