RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SIK3Q9Y2K2 1263 aa6.72□□□□□ -1.33
KDM3B-208ENST00000512928 PAXBP1Q9Y5B6 917 aa6.72□□□□□ -1.33
KDM3B-208ENST00000512928 SDK1Q7Z5N4 2213 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 A0A1B0GTH6 734 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 A0A1B0GVM2 712 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 LNP1A1A4G5 178 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TCAF2A6NFQ2 919 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 FAM47DPA6NHR8 397 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 C4orf47A7E2U8 309 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 BNIP3LO60238 219 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 RNASEH1O60930 286 aaKnown RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SRGAP2O75044 1071 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SERPINC1P01008 464 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 DNTTP04053 509 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ASLP04424 464 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 CDH5P33151 784 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 RDXP35241 583 aaKnown RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 FLT3P36888 993 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 NNMTP40261 264 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 CTSOP43234 321 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 GABRB2P47870 512 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 STK19P49842 368 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TPMTP51580 245 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 COPAP53621 1224 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 JAM2P57087 298 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ATP11AP98196 1134 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ECT2LQ008S8 904 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ZNF33AQ06730 810 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 MTA1Q13330 715 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ZNF177Q13360 481 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 AUHQ13825 339 aaKnown RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SLC25A52Q3SY17 297 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TTC31Q49AM3 519 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ACCSLQ4AC99 568 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 PPM1JQ5JR12 505 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 WDR45BQ5MNZ6 344 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SYCP2LQ5T4T6 812 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 FBXL22Q6P050 247 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 LRRC31Q6UY01 552 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TRIM72Q6ZMU5 477 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 GAS2L3Q86XJ1 694 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 APCDD1Q8J025 514 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 EMC1Q8N766 993 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 OR2T3Q8NH03 318 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 IGSF8Q969P0 613 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 RPL10LQ96L21 214 aaKnown RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ERGIC2Q96RQ1 377 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SELENOOQ9BVL4 669 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 IRX2Q9BZI1 471 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 MUC3BQ9H195 1237 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 CD248Q9HCU0 757 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TMEM9BQ9NQ34 198 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TMPRSS4Q9NRS4 437 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 TMEM74BQ9NUR3 256 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 RRN3Q9NYV6 651 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SUN2Q9UH99 717 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 NOCTQ9UK39 431 aaKnown RBP6.71□□□□□ -1.34
KDM3B-208ENST00000512928 VPS28Q9UK41 221 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 DAAM1Q9Y4D1 1078 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 SNX10Q9Y5X0 201 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 HS3ST4Q9Y661 456 aa6.71□□□□□ -1.34
KDM3B-208ENST00000512928 ANKRD62A6NC57 917 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 TMCO5BA8MYB1 307 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 TTC34A8MYJ7 566 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 GOLGA6L19H0YKK7 550 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 SLC30A4O14863 429 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 TEX33O43247 280 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 SIN3BO75182 1162 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 GJB6O95452 261 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 ADCY5O95622 1261 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 F9P00740 461 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 IL1BP01584 269 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 RHOCP08134 193 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 CCDC172P0C7W6 258 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 GNSP15586 552 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 FERP16591 822 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 CHRNB2P17787 502 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 ENGP17813 658 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 MAOBP27338 520 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 MZF1P28698 734 aaPredicted RBP6.7□□□□□ -1.34
KDM3B-208ENST00000512928 OXTRP30559 389 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 SDC4P31431 198 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 DPP6P42658 865 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 PSMD8P48556 350 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 IRAK1P51617 712 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 OXCT1P55809 520 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 RPS14P62263 151 aaKnown RBP6.7□□□□□ -1.34
KDM3B-208ENST00000512928 IRX4P78413 519 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 FMO1Q01740 532 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 GFPT1Q06210 699 aaPredicted RBP6.7□□□□□ -1.34
KDM3B-208ENST00000512928 CAMK2GQ13555 558 aaPredicted RBP6.7□□□□□ -1.34
KDM3B-208ENST00000512928 ENPP2Q13822 863 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 CLEC16AQ2KHT3 1053 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 PLEKHG6Q3KR16 790 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 SPDYCQ5MJ68 293 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 BRMS1LQ5PSV4 323 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 DCAF12L1Q5VU92 463 aa6.7□□□□□ -1.34
KDM3B-208ENST00000512928 OTUD1Q5VV17 481 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms