RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 NTSR2O95665 410 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 AK1P00568 194 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CYP3A4P08684 503 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARP10275 920 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 IFNGR1P15260 489 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CKMT2P17540 419 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CASP3P42574 277 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARHGDIBP52566 201 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARFIP2P53365 341 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TNFRSF17Q02223 184 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RNASELQ05823 741 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMEM132BQ14DG7 1078 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 C9orf152Q5JTZ5 239 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 KCNT1Q5JUK3 1230 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 GKAP1Q5VSY0 366 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 LINC00696Q6ZRV3 163 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CEP128Q6ZU80 1094 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CACNA2D4Q7Z3S7 1137 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 KBTBD6Q86V97 674 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 PROSER1Q86XN7 944 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 DHX40Q8IX18 779 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RNF10Q8N5U6 811 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 OR56A3Q8NH54 315 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 DUSP19Q8WTR2 217 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 NMD3Q96D46 503 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CCDC140Q96MF4 163 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RPRD1AQ96P16 312 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 GAL3ST1Q99999 423 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CCDC77Q9BR77 488 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TUBB6Q9BUF5 446 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZSCAN5AQ9BUG6 496 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CHST8Q9H2A9 424 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 HAUS4Q9H6D7 363 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 G6PC2Q9NQR9 355 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CLEC1BQ9P126 229 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ADAMTS6Q9UKP5 1117 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 SNX6Q9UNH7 406 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZFYVE9O95405 1425 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 LIPT2A6NK58 231 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SNAP23O00161 211 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 PSMD14O00487 310 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 CTDSP2O14595 271 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 IGHEP01854 428 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 WEE2P0C1S8 567 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 CD6P30203 668 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 MDH1P40925 334 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 GATA4P43694 442 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 BAG6P46379 1132 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 NRIP1P48552 1158 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ERVFC1P60507 584 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 GRM4Q14833 912 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 PCLAFQ15004 111 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLA2G2CQ5R387 149 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMC6Q7Z403 805 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ELMOD2Q8IZ81 293 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZCCHC7Q8N3Z6 543 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 EHBP1Q8NDI1 1231 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 DDI1Q8WTU0 396 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 AZIN2Q96A70 460 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 MAP6Q96JE9 813 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC6A16Q9GZN6 736 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC32A1Q9H598 525 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 XKR8Q9H6D3 395 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 FBRSL1Q9HCM7 1045 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARMCX3Q9UH62 379 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 DERAQ9Y315 318 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 TELO2Q9Y4R8 837 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 KCNE2Q9Y6J6 123 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SETBP1Q9Y6X0 1596 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 A0A0A6YYC8 382 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 I3L1I5 382 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 HDAC3O15379 428 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ACSL4O60488 711 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLS3P13797 630 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 GSPT1P15170 499 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 NPPBP16860 134 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 IL10P22301 178 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC16A2P36021 539 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 MAGEA10P43363 369 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ARF5P84085 180 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 PTP4A2Q12974 167 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC13A2Q13183 592 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 GPM6BQ13491 265 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ADRM1Q16186 407 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 GALNTL6Q49A17 601 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKRD20A4Q4UJ75 823 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 KHDC1Q4VXA5 237 aaKnown RBP6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKRD20A8PQ5CZ79 823 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKRD20A2Q5SQ80 823 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKRD20A1Q5TYW2 823 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKRD20A3Q5VUR7 823 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 SEZ6L2Q6UXD5 910 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMPRSS7Q7RTY8 843 aa6.49□□□□□ -1.37
TRAPPC11-209ENST00000512476 KANSL1Q7Z3B3 1105 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms