RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 CAPN9O14815 690 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 PSMG1O95456 288 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 TYK2P29597 1187 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 HADHAP40939 763 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 MAP3K7CLP57077 242 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 SLC34A1Q06495 639 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 GALNT2Q10471 571 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 KPNB1Q14974 876 aaKnown RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 RABGAP1LQ5R372 815 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 ITPRIPL1Q6GPH6 555 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 TWF2Q6IBS0 349 aaKnown RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 HFE2Q6ZVN8 426 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 NET1Q7Z628 596 aaPredicted RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 RASSF3Q86WH2 238 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 KLHDC8BQ8IXV7 354 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 SCML4Q8N228 414 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 RNF169Q8NCN4 708 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 RBM15BQ8NDT2 890 aaKnown RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 SLC7A14Q8TBB6 771 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 PPP4R1Q8TF05 950 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 IRGQQ8WZA9 623 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 SENP8Q96LD8 212 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 RILPQ96NA2 401 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 FCRL3Q96P31 734 aaPredicted RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 RBBP8Q99708 897 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 PTPN18Q99952 460 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 GORASP1Q9BQQ3 440 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 MED10Q9BTT4 135 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 COLEC11Q9BWP8 271 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 ULBP1Q9BZM6 244 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 KRT82Q9NSB4 513 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 DDX43Q9NXZ2 648 aaKnown RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 KLHL8Q9P2G9 620 aaPredicted RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 ZNF212Q9UDV6 495 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 DNAJB4Q9UDY4 337 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 CDH9Q9ULB4 789 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 VANGL2Q9ULK5 521 aa9.46□□□□□ -0.89
CPNE4-210ENST00000512332 APOBEC2Q9Y235 224 aaKnown RBP9.46□□□□□ -0.89
CPNE4-210ENST00000512332 ZCWPW2A0A1B0GU75 182 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 YJEFN3A6XGL0 299 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 FAM72CH0Y354 149 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 H0Y3Z8 333 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 KIF1CO43896 1103 aaKnown RBP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 TOP3BO95985 862 aaKnown RBP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 LTFP02788 710 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 MPOP05164 745 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 ENO1P06733 434 aaKnown RBP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 CYP2B6P20813 491 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 ACAT1P24752 427 aaKnown RBP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SERPINB6P35237 376 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 MLH1P40692 756 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 CXCR3P49682 368 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SERPINB8P50452 374 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 LIMK2P53671 638 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 TPI1P60174 286 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 PRAMEF19Q5SWL8 479 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 FAM72AQ5TYM5 149 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SPRYD7Q5W111 196 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 FAM72DQ6L9T8 149 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 C16orf46Q6P387 395 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 ZCCHC23Q6ZST2 131 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 FAM35AQ86V20 835 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 FAM72BQ86X60 149 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 GSTCDQ8NEC7 633 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 WDR60Q8WVS4 1066 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 DNAJC9Q8WXX5 260 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 DPF3Q92784 378 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 STMN2Q93045 179 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 ZNF333Q96JL9 665 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 ZNF778Q96MU6 729 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SMOQ99835 787 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SYT15Q9BQS2 421 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 MCMBPQ9BTE3 642 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 GBA3Q9H227 469 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 CSNK1G1Q9HCP0 422 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 CHST12Q9NRB3 414 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 TMEM216Q9P0N5 145 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SEPT10Q9P0V9 454 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 MARCOQ9UEW3 520 aaPredicted RBP9.46□□□□□ -0.9
CPNE4-210ENST00000512332 DNAJC16Q9Y2G8 782 aa9.46□□□□□ -0.9
CPNE4-210ENST00000512332 SYNJ2BP-COX16A0A087WUM0 186 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 PRR5-ARHGAP8B1AHC4 643 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 HHLA1C9JL84 531 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 I6L893 689 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-210ENST00000512332 KCNK1O00180 336 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
CPNE4-210ENST00000512332 PSMD3O43242 534 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ITM2AO43736 263 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CACNG3O60359 315 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 AP1G2O75843 785 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 ERVK-10P10266 1014 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 KITP10721 976 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 CPA3P15088 417 aa9.45□□□□□ -0.9
CPNE4-210ENST00000512332 DNAJB1P25685 340 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms