RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ARL3P36405 182 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 LSSP48449 732 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 GCLCP48506 637 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 LBX1P52954 281 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 METAP1P53582 386 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ATXN3P54252 364 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 YWHAZP63104 245 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RPP30P78346 268 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 NNTQ13423 1086 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 KMT5BQ4FZB7 885 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TWF2Q6IBS0 349 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 CYB5R4Q7L1T6 521 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 C16orf59Q7L2K0 433 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 NUDT13Q86X67 352 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MCEMP1Q8IX19 187 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ALDH16A1Q8IZ83 802 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SYCP3Q8IZU3 236 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNF152Q8N8N0 203 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 IGSF22Q8N9C0 903 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SHCBP1Q8NEM2 672 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 LPCAT1Q8NF37 534 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 STYXQ8WUJ0 223 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLC5A5Q92911 643 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 COA7Q96BR5 231 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF653Q96CK0 615 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 IQCDQ96DY2 449 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAML3Q96JK9 1138 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 CCDC17Q96LX7 622 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAGEB10Q96LZ2 347 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MNTQ99583 582 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TM9SF2Q99805 663 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 NTMT1Q9BV86 223 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 UPF3BQ9BZI7 483 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZCCHC2Q9C0B9 1178 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF518BQ9C0D4 1074 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNF41Q9H4P4 317 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PRDM13Q9H4Q3 707 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SPACA1Q9HBV2 294 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 FBXO28Q9NVF7 368 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MTMR4Q9NYA4 1195 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ASH2LQ9UBL3 628 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TRPS1Q9UHF7 1281 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PCDHA11Q9Y5I1 949 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 USP3Q9Y6I4 520 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF536O15090 1300 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ROBO3Q96MS0 1386 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 A0A0G2JLL6 359 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM234BA2RU67 622 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZSCAN5BA6NJL1 495 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TTLL8A6PVC2 850 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 F5H6K3 240 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 KIAA0355O15063 1070 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 VEGFDO43915 354 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 DTNBO60941 627 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MTX2O75431 263 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PTBP3O95758 552 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TTLL1O95922 423 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SUPT20HL2P0C7V6 817 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 GOLGA8HP0CJ92 632 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 GAAP10253 952 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 UBL4AP11441 157 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 POU2F1P14859 743 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RXRAP19793 462 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 BMP6P22004 513 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RPA1P27694 616 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PSMC2P35998 433 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF81P51508 661 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PMS2P54278 862 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MFAP3P55082 362 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SNAP25P60880 206 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PSMA6P60900 246 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SSTP61278 116 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PRKCEQ02156 737 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TYRO3Q06418 890 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 KLRC3Q07444 240 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 GALNT2Q10471 571 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAMLD1Q13495 774 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 NECTIN1Q15223 517 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TRADDQ15628 312 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TBCCQ15814 346 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNASEH2BQ5TBB1 312 aaKnown RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SHEQ5VZ18 495 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SUSD1Q6UWL2 747 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNF19BQ6ZMZ0 732 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF704Q6ZNC4 412 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 USP45Q70EL2 814 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 KCTD1Q719H9 257 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAEAQ7L5Y9 396 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PRRT2Q7Z6L0 340 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 TAF8Q7Z7C8 310 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RFX6Q8HWS3 928 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 ANKRD13CQ8N6S4 541 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 OR10H5Q8NGA6 315 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 PIP4K2CQ8TBX8 421 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 STT3BQ8TCJ2 826 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLC26A7Q8TE54 656 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 LRRC39Q96DD0 335 aa5.18□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms