RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 UCMAQ8WVF2 138 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 GOLGA1Q92805 767 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 FAM149B1Q96BN6 582 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 SLC2A13Q96QE2 648 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 CPXM1Q96SM3 734 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 TUBGCP2Q9BSJ2 902 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 EDEM2Q9BV94 578 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 NAA15Q9BXJ9 866 aaKnown RBP6.04□□□□□ -1.44
RNF4-217ENST00000511892 CIPCQ9C0C6 399 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 LHX5Q9H2C1 402 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 TMEM245Q9H330 911 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 NDST4Q9H3R1 872 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 PRDM16Q9HAZ2 1276 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 POPDC2Q9HBU9 364 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 PLCB1Q9NQ66 1216 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 FSCN3Q9NQT6 498 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 ITM2CQ9NQX7 267 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 SAMSN1Q9NSI8 373 aaKnown RBP6.04□□□□□ -1.44
RNF4-217ENST00000511892 ABCB8Q9NUT2 735 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 USP36Q9P275 1121 aaKnown RBP6.04□□□□□ -1.44
RNF4-217ENST00000511892 EVLQ9UI08 416 aaPredicted RBP6.04□□□□□ -1.44
RNF4-217ENST00000511892 XPO7Q9UIA9 1087 aaKnown RBP6.04□□□□□ -1.44
RNF4-217ENST00000511892 GGA2Q9UJY4 613 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 PCDHGC3Q9UN70 934 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 TLR6Q9Y2C9 796 aa6.04□□□□□ -1.44
RNF4-217ENST00000511892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
RNF4-217ENST00000511892 KCNU1A8MYU2 1149 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 CAPN9O14815 690 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 GIPC1O14908 333 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 ZBTB24O43167 697 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 SART1O43290 800 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 GRAP2O75791 330 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 KCNK5O95279 499 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 MOCS2O96007 188 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 SERPINC1P01008 464 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 IGLV3-19P01714 112 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 ERBB2P04626 1255 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 EPHX1P07099 455 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 DLDP09622 509 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 PABPC1P11940 636 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 SNRPBP14678 240 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 CD6P30203 668 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 HOXD12P35452 270 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 CTSOP43234 321 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 TPMTP51580 245 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 TERF1P54274 439 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 UBASH3AP57075 661 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 PTK2Q05397 1052 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 ZNF33AQ06730 810 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 LMAN2Q12907 356 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 CAMK2GQ13555 558 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 STARD3Q14849 445 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 PTPN20Q4JDL3 420 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 FILIP1LQ4L180 1135 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 DCAF6Q58WW2 860 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 TCP11X2Q5H9J9 407 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 MS4A13Q5J8X5 152 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 N4BP2L1Q5TBK1 243 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 KLHDC7AQ5VTJ3 777 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 OTUD1Q5VV17 481 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 RAP1GAP2Q684P5 730 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 SMYD5Q6GMV2 418 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 OLFML1Q6UWY5 402 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 SERPINA13PQ6UXR4 307 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 MMS22LQ6ZRQ5 1243 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 FAM183BPQ6ZVS7 135 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 FAM114A1Q8IWE2 563 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 DEFB106AQ8N104 65 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 AHI1Q8N157 1196 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 CFAP52Q8N1V2 620 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 C1orf131Q8NDD1 294 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 CCDC112Q8NEF3 446 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 DDX1Q92499 740 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 TTC17Q96AE7 1141 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 SIPA1Q96FS4 1042 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 TOE1Q96GM8 510 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 MYO19Q96H55 970 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 PPP1R13BQ96KQ4 1090 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 MRGPRX3Q96LB0 322 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 HSPA12BQ96MM6 686 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 SERPINB11Q96P15 392 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 PRMT1Q99873 361 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 MTG2Q9H4K7 406 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 CAPN10Q9HC96 672 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 TMEM9BQ9NQ34 198 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 KCND1Q9NSA2 647 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 SPTLC3Q9NUV7 552 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 ASNSD1Q9NWL6 643 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 WSB2Q9NYS7 404 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 IFNKQ9P0W0 207 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 STIM2Q9P246 746 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 INTS6Q9UL03 887 aaKnown RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 NFE2L3Q9Y4A8 694 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 FHOD1Q9Y613 1164 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 NBEAQ8NFP9 2946 aa6.03□□□□□ -1.44
RNF4-217ENST00000511892 ARID1BQ8NFD5 2236 aaPredicted RBP6.03□□□□□ -1.44
RNF4-217ENST00000511892 ANKRD36A6QL64 1941 aa6.02□□□□□ -1.45
RNF4-217ENST00000511892 SYNJ2BP-COX16A0A087WUM0 186 aa6.02□□□□□ -1.45
RNF4-217ENST00000511892 FAM170AA1A519 330 aa6.02□□□□□ -1.45
RNF4-217ENST00000511892 LRRC10BA6NIK2 292 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms