RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TFF2Q03403 129 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 TLE2Q04725 743 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 CHRNDQ07001 517 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 HNRNPA0Q13151 305 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 SEC23BQ15437 767 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ARL13AQ5H913 290 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 CBWD5Q5RIA9 395 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 MAP3K21Q5TCX8 1036 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ZNF782Q6ZMW2 699 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 TMEM200AQ86VY9 491 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ADGRG3Q86Y34 549 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ENDOVQ8N8Q3 282 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 USP38Q8NB14 1042 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 PNISRQ8TF01 805 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 HASPINQ8TF76 798 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 HVCN1Q96D96 273 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ZG16BQ96DA0 208 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ADAD1Q96M93 576 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 FCRL5Q96RD9 977 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 GPR63Q9BZJ6 419 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 PRDM13Q9H4Q3 707 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ACAD9Q9H845 621 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 THAP1Q9NVV9 213 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 ARL15Q9NXU5 204 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 PDP2Q9P2J9 529 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 GDAQ9Y2T3 454 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 LMTK3Q96Q04 1460 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 LINC01548A6NM66 108 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 MCIDASD6RGH6 385 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 EYA2O00167 538 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 HOXC11O43248 304 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 PLAUP00749 431 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 PRKCGP05129 697 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 IFIT1P09914 478 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 CYP4B1P13584 511 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 PKMP14618 531 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 FBLP22087 321 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 PRPH2P23942 346 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 PRKCHP24723 683 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 PGM1P36871 562 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 CCR5P51681 352 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 OAZ1P54368 228 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 NANOS3P60323 173 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 SLC10A2Q12908 348 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 MAPK7Q13164 816 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 G3BP1Q13283 466 aaKnown RBP eCLIP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 THOC5Q13769 683 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 GXYLT1Q4G148 440 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 LIPMQ5VYY2 423 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 MTFR2Q6P444 385 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 HEATR4Q86WZ0 1026 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 RFX6Q8HWS3 928 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 TMTC1Q8IUR5 882 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 CNGA4Q8IV77 575 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 ADGRF4Q8IZF3 695 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 FAM98AQ8NCA5 519 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 SEMA6DQ8NFY4 1073 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 ZNF347Q96SE7 839 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 SEC62Q99442 399 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 NPAS1Q99742 590 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 TM2D2Q9BX73 214 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 STN1Q9H668 368 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 WASH6PQ9NQA3 447 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 TLR8Q9NR97 1041 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 KLQ9UEF7 1012 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 SLC13A4Q9UKG4 626 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 GJD2Q9UKL4 321 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 TNFSF13BQ9Y275 285 aa3.76□□□□□ -1.81
TRAPPC11-207ENST00000511409 SPATA31A5Q5VU36 1347 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 SPATA31A7Q8IWB4 1347 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 WDR17Q8IZU2 1322 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 SLC22A23A1A5C7 686 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 USP12O75317 370 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 NFATC1O95644 943 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 CD63P08962 238 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 HNRNPA1P09651 372 aaKnown RBP eCLIP3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 HOXB9P17482 250 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 CD53P19397 219 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 MPGP29372 298 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 RPS6KA3P51812 740 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 PROK1P58294 105 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 TBX2Q13207 712 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 TDGQ13569 410 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 NFIL3Q16649 462 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 C10orf76Q5T2E6 689 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 ANO7Q6IWH7 933 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 DENND1BQ6P3S1 775 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 SLC30A9Q6PML9 568 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 ZNF813Q6ZN06 617 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 RBM44Q6ZP01 1051 aaKnown RBP3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 BBS12Q6ZW61 710 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 PTF1AQ7RTS3 328 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 RNF144BQ7Z419 303 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 MDGA2Q7Z553 956 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 SCN4BQ8IWT1 228 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 DNAJC10Q8IXB1 793 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 TCP11L2Q8N4U5 519 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 FAM47BQ8NA70 645 aa3.75□□□□□ -1.81
TRAPPC11-207ENST00000511409 C8orf58Q8NAV2 365 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms