RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 TMEM51Q9NW97 253 aa13.06□□□□□ -0.32
KDM3B-206ENST00000509468 FBXL12Q9NXK8 326 aa13.06□□□□□ -0.32
KDM3B-206ENST00000509468 INTS6Q9UL03 887 aaKnown RBP13.06□□□□□ -0.32
KDM3B-206ENST00000509468 APOBEC2Q9Y235 224 aaKnown RBP13.06□□□□□ -0.32
KDM3B-206ENST00000509468 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
KDM3B-206ENST00000509468 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
KDM3B-206ENST00000509468 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
KDM3B-206ENST00000509468 LRRC72A6NJI9 287 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 DFNA5O60443 496 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 HSF2BPO75031 334 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 FSBPO95073 299 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 PLK1P53350 603 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 FAM193AP78312 1265 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 TAF5Q15542 800 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 CST6Q15828 149 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 RABGAP1LQ5R372 815 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 C9orf64Q5T6V5 341 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 RAB44Q7Z6P3 723 aaPredicted RBP13.05□□□□□ -0.32
KDM3B-206ENST00000509468 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 ZDHHC17Q8IUH5 632 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
KDM3B-206ENST00000509468 DEFB106AQ8N104 65 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 GATA6Q92908 595 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 MYEOVQ96EZ4 313 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 CDC6Q99741 560 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 CHMP5Q9NZZ3 219 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 DNAJC12Q9UKB3 198 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
KDM3B-206ENST00000509468 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 A0A1B0GVT2 93 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 FOXN3O00409 490 aaPredicted RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 C5AR1P21730 350 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 SLC8A1P32418 973 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 NOS2P35228 1153 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 GRIA4P48058 902 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 GALCP54803 685 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 BNC1Q01954 994 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 SLC6A3Q01959 620 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 ZNF177Q13360 481 aaPredicted RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 KIF19Q2TAC6 998 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 MMS22LQ6ZRQ5 1243 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 MMAAQ8IVH4 418 aaKnown RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 APCDD1Q8J025 514 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 RHBDD1Q8TEB9 315 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 ADAMTS14Q8WXS8 1223 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 CPXM1Q96SM3 734 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 PRMT1Q99873 361 aaKnown RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 MTG2Q9H4K7 406 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 RRN3Q9NYV6 651 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 SLCO3A1Q9UIG8 710 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 PCOLCE2Q9UKZ9 415 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 ZMIZ1Q9ULJ6 1067 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 FZD4Q9ULV1 537 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 TPX2Q9ULW0 747 aaKnown RBP13.04□□□□□ -0.32
KDM3B-206ENST00000509468 ITIH6Q6UXX5 1313 aa13.04□□□□□ -0.32
KDM3B-206ENST00000509468 A0A1B0GVM2 712 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 TCAF2A6NFQ2 919 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 MID1O15344 667 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 FLRT2O43155 660 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 CBFA2T3O75081 653 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 ADH1BP00325 375 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 GOT1P17174 413 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 CLCN1P35523 988 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 CTSOP43234 321 aaPredicted RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 C21orf59P57076 290 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 RACK1P63244 317 aaKnown RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 ADAT2Q7Z6V5 191 aaKnown RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 OR2T34Q8NGX1 318 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 RPL10LQ96L21 214 aaKnown RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 FAM129BQ96TA1 746 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
KDM3B-206ENST00000509468 NEUROG2Q9H2A3 272 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 PDCL3Q9H2J4 239 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 NDST4Q9H3R1 872 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 WDCPQ9H6R7 721 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 KLK13Q9UKR3 277 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms