RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 EPHX1P07099 455 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 GLI1P08151 1106 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF806P0C7X5 589 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ACADMP11310 421 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 GABRG2P18507 467 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 POLR2EP19388 210 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ABCB4P21439 1286 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 TGM1P22735 817 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 HOXD9P28356 352 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 P2RY2P41231 377 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 MATKP42679 507 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 NSFP46459 744 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 HDAC4P56524 1084 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 RPL6Q02878 288 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CDH18Q13634 790 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 EIF4HQ15056 248 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 SF3A2Q15428 464 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC18A3Q16572 532 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 PIK3R6Q5UE93 754 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 PMS2CLQ68D20 193 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 IL31Q6EBC2 164 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 TXNRD3NBQ6F5E7 133 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 SERPINA13PQ6UXR4 307 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC36A4Q6YBV0 504 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CHST9Q7L1S5 443 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ERMP1Q7Z2K6 904 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 C14orf80Q86SX3 495 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CNGA4Q8IV77 575 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 MFN1Q8IWA4 741 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CARNMT1Q8N4J0 409 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 DEFB119Q8N690 84 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ATP6V0D2Q8N8Y2 350 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF557Q8N988 423 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 HJURPQ8NCD3 748 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 MSANTD4Q8NCY6 345 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 NETO1Q8TDF5 533 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 WFIKKN2Q8TEU8 576 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 SORCS1Q8WY21 1168 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CENPIQ92674 756 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 AZIN2Q96A70 460 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 MCEEQ96PE7 176 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 PRMT1Q99873 361 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 GABRG3Q99928 467 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 NUCKS1Q9H1E3 243 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 OSGEPQ9NPF4 335 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 ABCB8Q9NUT2 735 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 DDIT4Q9NX09 232 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 THAP10Q9P2Z0 257 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CNOT8Q9UFF9 292 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 GGA2Q9UJY4 613 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 STOML2Q9UJZ1 356 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 CYP8B1Q9UNU6 501 aa9.04□□□□□ -0.96
PDLIM5-213ENST00000509357 BCLAF3A2AJT9 711 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 DCDC2BA2VCK2 349 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 GOLGA6L3A6NEY3 463 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 TMEM191CA6NGB0 347 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 F5H5T6 163 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 H0Y626 953 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 M0QYT0 321 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 KHNYNO15037 678 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 GDF9O60383 454 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 MOCS3O95396 460 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CYP1A2P05177 515 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 ATP5BP06576 529 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC2A3P11169 496 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 PABPC1P11940 636 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 NDUFV2P19404 249 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 HLA-FP30511 346 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CCR1P32246 355 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 NOS2P35228 1153 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 IL12RB1P42701 662 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CXCR3P49682 368 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 SULT1E1P49888 294 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 ST8SIA6P61647 398 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CCZ1BP86790 482 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CCZ1P86791 482 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 ATP11AP98196 1134 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 FOXK2Q01167 660 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 NME3Q13232 169 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 NNTQ13423 1086 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF234Q14588 700 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CDO1Q16878 200 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CCDC122Q5T0U0 273 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 MPP7Q5T2T1 576 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 RAP1GAP2Q684P5 730 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 RNF43Q68DV7 783 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 SND1Q7KZF4 910 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 ARCQ7LC44 396 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CHSY1Q86X52 802 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CACUL1Q86Y37 369 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 ZDHHC17Q8IUH5 632 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 LGI2Q8N0V4 545 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 AHI1Q8N157 1196 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CFAP52Q8N1V2 620 aa9.03□□□□□ -0.96
PDLIM5-213ENST00000509357 CCDC185Q8N715 623 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms