RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 COQ9O75208 318 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 STBD1O95210 358 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 PIGRP01833 764 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 EDN1P05305 212 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 KCNA2P16389 499 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 CDH15P55291 814 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 LSM12Q3MHD2 195 aaKnown RBP14.65□□□□□ -0.06
TRIM41-204ENST00000508930 TMEM198Q66K66 360 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 PCDH20Q8N6Y1 951 aaKnown RBP14.65□□□□□ -0.06
TRIM41-204ENST00000508930 CCNYL1Q8N7R7 359 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 TMEM176AQ96HP8 235 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 NPAS2Q99743 824 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 TLK1Q9UKI8 766 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 AP4S1Q9Y587 144 aa14.65□□□□□ -0.06
TRIM41-204ENST00000508930 COL16A1Q07092 1604 aaPredicted RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 POLBP06746 335 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 CDK9P50750 372 aaKnown RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 CAPSQ13938 189 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF786Q8N393 782 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 DNAAF3Q8N9W5 541 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 COLGALT1Q8NBJ5 622 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 NETO2Q8NC67 525 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 MOCOSQ96EN8 888 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 TWNKQ96RR1 684 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 RPF1Q9H9Y2 349 aaKnown RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 KLRG2A4D1S0 409 aaPredicted RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 HDAC3O15379 428 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 PIGNO95427 931 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 H6PDO95479 791 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF23P17027 643 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 GTF2A2P52657 109 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 FKBP1AP62942 108 aaKnown RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ABHD15Q6UXT9 468 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 PGAM4Q8N0Y7 254 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 GATA5Q9BWX5 397 aaPredicted RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 TASP1Q9H6P5 420 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 HMGXB4Q9UGU5 601 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 MID2Q9UJV3 735 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 DOLKQ9UPQ8 538 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 MYO18AQ92614 2054 aaKnown RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 C2CD4BA6NLJ0 364 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 RNASEH2AO75792 299 aaKnown RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF189O75820 626 aaPredicted RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 CHRNGP07510 517 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 PGAM1P18669 254 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 MAGEA10P43363 369 aaPredicted RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 APOFQ13790 326 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF423Q2M1K9 1284 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 IL23RQ5VWK5 629 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 XRRA1Q6P2D8 792 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 BORAQ6PGQ7 559 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ATG4CQ96DT6 458 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF512Q96ME7 567 aaPredicted RBP14.64□□□□□ -0.07
TRIM41-204ENST00000508930 OSBPL6Q9BZF3 934 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 CAB39LQ9H9S4 337 aa14.64□□□□□ -0.07
TRIM41-204ENST00000508930 STRCQ7RTU9 1775 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 VAPBO95292 243 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 PPARGP37231 505 aaPredicted RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 EMP3P54852 163 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 IFRD2Q12894 506 aaPredicted RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 SNRNP48Q6IEG0 339 aaKnown RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 C16orf87Q6PH81 154 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 CYP2R1Q6VVX0 501 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ZPBP2Q6X784 338 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 TRIM50Q86XT4 487 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 SMYD1Q8NB12 490 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 KBTBD7Q8WVZ9 684 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 PFDN4Q9NQP4 134 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF195O14628 629 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 NOL3O60936 208 aaKnown RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ATG7O95352 703 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 CD1EP15812 388 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ZFXP17010 805 aaPredicted RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 PTPN1P18031 435 aaKnown RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 TCF7P36402 384 aaPredicted RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 TMEM62Q0P6H9 643 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ATG14Q6ZNE5 492 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ZBTB49Q6ZSB9 765 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ZNF534Q76KX8 674 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 PLD6Q8N2A8 252 aaKnown RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 PIWIL1Q96J94 861 aaKnown RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 OSBPL11Q9BXB4 747 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ELOVL4Q9GZR5 314 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 NMRAL1Q9HBL8 299 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 FAM49BQ9NUQ9 324 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 USP21Q9UK80 565 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 GCATO75600 419 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 ITGB3P05106 788 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 PDGFRBP09619 1106 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 CCDC130P13994 396 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 TFE3P19532 575 aaPredicted RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 GLRBP48167 497 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 RPL14P50914 215 aaKnown RBP14.63□□□□□ -0.07
TRIM41-204ENST00000508930 EFNA5P52803 228 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 CNTN2Q02246 1040 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 VPS72Q15906 364 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 MGAT5BQ3V5L5 792 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 LAYNQ6UX15 382 aa14.63□□□□□ -0.07
TRIM41-204ENST00000508930 LRTOMTQ8WZ04 291 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms