RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MAST3O60307 1309 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TAF1P21675 1872 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 UPK3BL1B0FP48 263 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 UPK3BL2E5RIL1 263 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SSX5O60225 188 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DAB1O75553 588 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RAD51DO75771 328 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SEC31AO94979 1220 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ADH1CP00326 375 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CAPN1P07384 714 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM253P0C7T8 217 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PKMP14618 531 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CYP7A1P22680 504 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RFC4P35249 363 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GRIA2P42262 883 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ETV1P50549 477 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TUBP50607 506 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ARPC4P59998 168 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RPS16P62249 146 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CHRNDQ07001 517 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SPA17Q15506 151 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ERCC6LQ2NKX8 1250 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PPM1JQ5JR12 505 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 C9orf152Q5JTZ5 239 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 AADACL4Q5VUY2 407 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NCAPH2Q6IBW4 605 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DOK6Q6PKX4 331 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 METTL6Q8TCB7 284 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 HASPINQ8TF76 798 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 WNT2BQ93097 391 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 LINGO1Q96FE5 620 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RAX2Q96IS3 184 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ACTL8Q9H568 366 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TUFT1Q9NNX1 390 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PNPOQ9NVS9 261 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 OXSMQ9NWU1 459 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NKIRAS1Q9NYS0 192 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 KCNH3Q9ULD8 1083 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 WBP11Q9Y2W2 641 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 USP15Q9Y4E8 981 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TLL2Q9Y6L7 1015 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CDK2AP1O14519 115 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ECDO95905 644 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 AK1P00568 194 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 QDPRP09417 244 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RPL10P27635 214 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RPS26P62854 115 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PTH1RQ03431 593 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TRAF1Q13077 416 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RIN1Q13671 783 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DACT2Q5SW24 774 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MBNL2Q5VZF2 373 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TWF2Q6IBS0 349 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PATL1Q86TB9 770 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 OSTM1Q86WC4 334 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF321PQ8N8H1 164 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF540Q8NDQ6 660 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BAHD1Q8TBE0 780 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DHTKD1Q96HY7 919 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ARL5BQ96KC2 179 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GCNAQ96QF7 691 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 JAM3Q9BX67 310 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 FUT8Q9BYC5 575 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TTYH3Q9C0H2 523 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SLC7A5P2Q9GIP4 190 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PCDHAC1Q9H158 963 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 VPS33BQ9H267 617 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MANSC1Q9H8J5 431 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MEAF6Q9HAF1 191 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ARHGEF4Q9NR80 690 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 AGPAT5Q9NUQ2 364 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TUBA8Q9NY65 449 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TRPM5Q9NZQ8 1165 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CEP72Q9P209 647 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 XDHP47989 1333 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 STK36Q9NRP7 1315 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 COL1A1P02452 1464 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 LRRC72A6NJI9 287 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CBX4O00257 560 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MAGEB3O15480 346 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BCAS2O75934 225 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ADH1BP00325 375 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 THP07101 528 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ACPPP15309 386 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ATP2A2P16615 1042 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NR2F2P24468 414 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CTSSP25774 331 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ECHS1P30084 290 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CSHL1Q14406 222 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MAPRE2Q15555 327 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TMCO2Q7Z6W1 182 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 FAM133AQ8N9E0 248 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 VPS50Q96JG6 964 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 HS6ST2Q96MM7 605 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GAL3ST1Q99999 423 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NT5C3AQ9H0P0 336 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DCP1AQ9NPI6 582 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms