RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 STRADAQ7RTN6 431 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 CIR1Q86X95 450 aaPredicted RBP15.53■□□□□ 0.08
TRIO-211ENST00000508343 FAM131BQ86XD5 332 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 CPLX3Q8WVH0 158 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 SYN2Q92777 582 aaPredicted RBP15.53■□□□□ 0.08
TRIO-211ENST00000508343 PPP1R9BQ96SB3 815 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 XPO4Q9C0E2 1151 aaKnown RBP15.53■□□□□ 0.08
TRIO-211ENST00000508343 TAS2R14Q9NYV8 317 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 SUN2Q9UH99 717 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 CAPN11Q9UMQ6 739 aa15.53■□□□□ 0.08
TRIO-211ENST00000508343 BZW2Q9Y6E2 419 aaKnown RBP15.53■□□□□ 0.08
TRIO-211ENST00000508343 SPAG17Q6Q759 2223 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 ANKRD62A6NC57 917 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 DRGXA6NNA5 263 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 CBFA2T2O43439 604 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 ZNF217O75362 1048 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 EPN2O95208 641 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 HLA-EP13747 358 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 GPD1P21695 349 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 BCKDHBP21953 392 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 TGM1P22735 817 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 RRM1P23921 792 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 PLK1P53350 603 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 CDH4P55283 916 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 ST8SIA6P61647 398 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 PLEKHG6Q3KR16 790 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 ARL13BQ3SXY8 428 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 PPP1R15BQ5SWA1 713 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 SH3PXD2AQ5TCZ1 1133 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 METTL3Q86U44 580 aaKnown RBP15.52■□□□□ 0.08
TRIO-211ENST00000508343 TMPRSS6Q8IU80 811 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 KIAA2013Q8IYS2 634 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 ZNF683Q8IZ20 524 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 APCDD1Q8J025 514 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 FRMD1Q8N878 549 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 KDM1BQ8NB78 822 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 TMPRSS4Q9NRS4 437 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 LUC7L2Q9Y383 392 aaKnown RBP15.52■□□□□ 0.08
TRIO-211ENST00000508343 SNX10Q9Y5X0 201 aa15.52■□□□□ 0.08
TRIO-211ENST00000508343 ABCA7Q8IZY2 2146 aa15.52■□□□□ 0.07
TRIO-211ENST00000508343 ITIH6Q6UXX5 1313 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRIO-211ENST00000508343 FTLP02792 175 aaPredicted RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 SRPRAP08240 638 aaKnown RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 ADRA1BP35368 520 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 IRAK1P51617 712 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 ZNF143P52747 638 aaPredicted RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 ECT2LQ008S8 904 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 SULT2A1Q06520 285 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 SPEM2Q0P670 501 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 CAMK2GQ13555 558 aaPredicted RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 RAB6CQ53S08 254 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 SPDYCQ5MJ68 293 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 HGSNATQ68CP4 663 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 PMS2CLQ68D20 193 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 CXorf57Q6NSI4 855 aaKnown RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 DCUN1D2Q6PH85 259 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 KIAA1324Q6UXG2 1013 aaKnown RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 RNF214Q8ND24 703 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 OR2T3Q8NH03 318 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 FAM172AQ8WUF8 416 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 MKRN2Q9H000 416 aaKnown RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 RAB6CQ9H0N0 254 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 SLC6A17Q9H1V8 727 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 ARRDC1-AS1Q9H2J1 176 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 PARD6AQ9NPB6 346 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 PARVAQ9NVD7 372 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 MBD1Q9UIS9 605 aaPredicted RBP15.51■□□□□ 0.07
TRIO-211ENST00000508343 ERVW-1Q9UQF0 538 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 TBC1D30Q9Y2I9 924 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 PCDHGA5Q9Y5G8 931 aa15.51■□□□□ 0.07
TRIO-211ENST00000508343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRIO-211ENST00000508343 IGLV3-10A0A075B6K4 115 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 E9PAM4 449 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 SRGAP2O75044 1071 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 RTN2O75298 545 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 CNTN5O94779 1100 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 GYPCP04921 128 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 SERPING1P05155 500 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 MZF1P28698 734 aaPredicted RBP15.5■□□□□ 0.07
TRIO-211ENST00000508343 CTSOP43234 321 aaPredicted RBP15.5■□□□□ 0.07
TRIO-211ENST00000508343 COPAP53621 1224 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 HDAC4P56524 1084 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 RPL7AP62424 266 aaKnown RBP15.5■□□□□ 0.07
TRIO-211ENST00000508343 MAMLD1Q13495 774 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 CSRP2Q16527 193 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 ALFQ53S48 1182 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 PLEKHA7Q6IQ23 1121 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 SLC36A4Q6YBV0 504 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 LPCAT2Q7L5N7 544 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 ZNF366Q8N895 744 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 PRCCQ92733 491 aaPredicted RBP15.5■□□□□ 0.07
TRIO-211ENST00000508343 SIPA1Q96FS4 1042 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 MYO19Q96H55 970 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 MRGPRX3Q96LB0 322 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 MCEEQ96PE7 176 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 FEM1AQ9BSK4 669 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 CNPY3Q9BT09 278 aa15.5■□□□□ 0.07
TRIO-211ENST00000508343 OSBPL2Q9H1P3 480 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms