RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 LTFP02788 710 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 MLNP12872 115 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 XRCC1P18887 633 aaPredicted RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 HMGB2P26583 209 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 PIK3R1P27986 724 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 PRDX6P30041 224 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 PKNOX1P55347 436 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 RPL26P61254 145 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CNGA3Q16281 694 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 PKDCCQ504Y2 493 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 EFCAB12Q6NXP0 572 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 KLHDC10Q6PID8 442 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 TDRD5Q8NAT2 981 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 DGCR14Q96DF8 476 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 HSFX1Q9UBD0 423 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 STK39Q9UEW8 545 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 HES2Q9Y543 173 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CDY2AQ9Y6F7 541 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 HCRTO43612 131 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 CHRNGP07510 517 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 GLDCP23378 1020 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 MPSTP25325 297 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 GP5P40197 560 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 NR2C2P49116 596 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 MYBPC1Q00872 1141 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 TMEM132DQ14C87 1099 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 LILRA2Q8N149 483 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 PIP4K2CQ8TBX8 421 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 CERS2Q96G23 380 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 AGAP2Q99490 1192 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 GPR20Q99678 358 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 R3HDMLQ9H3Y0 253 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 COPS7BQ9H9Q2 264 aaPredicted RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 PREBQ9HCU5 417 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 TCF7L2Q9NQB0 619 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 TMPRSS4Q9NRS4 437 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 C6orf203Q9P0P8 240 aaPredicted RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 AP4B1Q9Y6B7 739 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 RPS6KL1Q9Y6S9 549 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 PDLIM1O00151 329 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 USP12O75317 370 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 ZFXP17010 805 aaPredicted RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 ACAT1P24752 427 aaKnown RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 RGS2P41220 211 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 RPL5P46777 297 aaKnown RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 PGGT1BP53609 377 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 USP46P62068 366 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 MAP7Q14244 749 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 SOWAHAQ2M3V2 549 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 POTEAQ6S8J7 498 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 TMEM110Q86TL2 294 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 ACVR1CQ8NER5 493 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 SLC35F5Q8WV83 523 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 USP13Q92995 863 aaPredicted RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 CDRT15Q96T59 188 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 C11orf84Q9BUA3 381 aaPredicted RBP13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 PDZD7Q9H5P4 517 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 PTTG2Q9NZH5 202 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 RIMS3Q9UJD0 308 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 USP3Q9Y6I4 520 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 AK5Q9Y6K8 562 aa13.74□□□□□ -0.21
SNCAIP-209ENST00000508017 ZNF487B1APH4 448 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 STX16-NPEPL1H3BU86 382 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 PPEF2O14830 753 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 CFLARO15519 480 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 HNRNPRO43390 633 aaKnown RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 EPHA3P29320 983 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 CDKL1Q00532 357 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 MS4A2Q01362 244 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 ADGRE1Q14246 886 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 FLOT2Q14254 428 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 MYLK3Q32MK0 819 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 TP53INP2Q8IXH6 220 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 P2RY11Q96G91 374 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 LRGUKQ96M69 825 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 DDX18Q9NVP1 670 aaKnown RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 DPP3Q9NY33 737 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 MAGED2Q9UNF1 606 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 CITO14578 2027 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 NOP56O00567 594 aaKnown RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 GAS2O43903 313 aaKnown RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 PENKP01210 267 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 SRGAP2BP0DMP2 458 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 EDNRBP24530 442 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 DPP6P42658 865 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 NUMBP49757 651 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 IGBP1P78318 339 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 CEACAM7Q14002 265 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms