RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 GRK5P34947 590 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 RFC1P35251 1148 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 ARL1P40616 181 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 MLH1P40692 756 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CAPZA2P47755 286 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 AMPHP49418 695 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TUBP50607 506 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 RCAN1P53805 252 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SLC26A5P58743 744 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 ACTR2P61160 394 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SARNPP82979 210 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CHRNDQ07001 517 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SCN1BQ07699 218 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SRSF4Q08170 494 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TEFQ10587 303 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 GRSF1Q12849 480 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 UBXN2BQ14CS0 331 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CYP2A13Q16696 494 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 IMMTQ16891 758 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 C15orf59Q2T9L4 293 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 WSCD2Q2TBF2 565 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 LRRC23Q53EV4 343 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SLC44A4Q53GD3 710 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 XKR9Q5GH70 373 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 AKNAD1Q5T1N1 836 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 DEPDC1Q5TB30 811 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 AP1ARQ63HQ0 302 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 ARL6IP4Q66PJ3 421 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 KAZNQ674X7 775 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TANGO2Q6ICL3 276 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 LIN54Q6MZP7 749 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 ZNF529Q6P280 563 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 WDR73Q6P4I2 378 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 FOXR2Q6PJQ5 311 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 FIP1L1Q6UN15 594 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 FAM180AQ6UWF9 173 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 ATF7IPQ6VMQ6 1270 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 FAM83HQ6ZRV2 1179 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 MIGA2Q7L4E1 593 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 UBE3BQ7Z3V4 1068 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 R3HCC1LQ7Z5L2 792 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CEP97Q8IW35 865 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CMIPQ8IY22 773 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 MAML2Q8IZL2 1156 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 ADSSL1Q8N142 457 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 PQLC1Q8N2U9 271 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 C17orf53Q8N3J3 647 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 HDDC3Q8N4P3 179 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 USP38Q8NB14 1042 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 DRAXINQ8NBI3 349 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 PCSK9Q8NBP7 692 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 FAM71BQ8TC56 605 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 THAP4Q8WY91 577 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SMG7Q92540 1137 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 WASF1Q92558 559 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 DDX17Q92841 729 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TUBGCP3Q96CW5 907 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CABS1Q96KC9 395 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 FAM167AQ96KS9 214 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CTAGE1Q96RT6 745 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 HEPHQ9BQS7 1158 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 MXD3Q9BW11 206 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 BRIP1Q9BX63 1249 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TEX12Q9BXU0 123 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 GPR63Q9BZJ6 419 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 KRT23Q9C075 422 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 IQCGQ9H095 443 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 MMADHCQ9H3L0 296 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TASP1Q9H6P5 420 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 EPS8L2Q9H6S3 715 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 UNKLQ9H9P5 680 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 RXFP3Q9NSD7 469 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SNTG1Q9NSN8 517 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 MOCS1Q9NZB8 636 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 TEKT2Q9UIF3 430 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 PCDHGB4Q9UN71 923 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 AURKCQ9UQB9 309 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 PCDHGB5Q9Y5G0 923 aa3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 CFAP20Q9Y6A4 193 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.81□□□□□ -1.8
HMGB3P15-201ENST00000507326 COL3A1P02461 1466 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 IL16Q14005 1332 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 A0A088AWK7 358 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 GPR89AB7ZAQ6 455 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 PTGES3LE9PB15 166 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 KIF2AO00139 706 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 EBAG9O00559 213 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 PODXLO00592 558 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 TRIM38O00635 465 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 TSPAN4O14817 238 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 NPC1O15118 1278 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 RIPK2O43353 540 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 FMO6PO60774 539 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 GUCY1B2O75343 617 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 PTP4A3O75365 173 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 CSPG5O95196 566 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 KIF20AO95235 890 aa3.8□□□□□ -1.8
HMGB3P15-201ENST00000507326 METTL18O95568 372 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms