RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GFRA3O60609 400 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 PLEKP08567 350 aaPredicted RBP17.19■□□□□ 0.34
SNCA-209ENST00000506244 PSMA2P25787 234 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 ADRA1BP35368 520 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 GGCXP38435 758 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 CSKP41240 450 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 IL12RB1P42701 662 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 NRG1Q02297 640 aaPredicted RBP17.19■□□□□ 0.34
SNCA-209ENST00000506244 SCAPQ12770 1279 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 SIM2Q14190 667 aaPredicted RBP17.19■□□□□ 0.34
SNCA-209ENST00000506244 PLEKHG6Q3KR16 790 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 USP39Q53GS9 565 aaKnown RBP17.19■□□□□ 0.34
SNCA-209ENST00000506244 EFHC2Q5JST6 749 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 RNF219Q5W0B1 726 aaPredicted RBP17.19■□□□□ 0.34
SNCA-209ENST00000506244 PRR23BQ6ZRT6 265 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 PGBD3Q8N328 593 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 KDM1BQ8NB78 822 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 IGSF8Q969P0 613 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 TTC17Q96AE7 1141 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 LMLNQ96KR4 655 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 RETREG1Q9H6L5 497 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 ARHGAP20Q9P2F6 1191 aa17.19■□□□□ 0.34
SNCA-209ENST00000506244 MUC22E2RYF6 1773 aaPredicted RBP17.19■□□□□ 0.34
SNCA-209ENST00000506244 A0A087X0T9 212 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 I6L893 689 aaPredicted RBP17.18■□□□□ 0.34
SNCA-209ENST00000506244 EPHX1P07099 455 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 FAM228BP0C875 321 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 FSCBQ5H9T9 825 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 C6orf118Q5T5N4 469 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 SH3PXD2AQ5TCZ1 1133 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 ALKBH5Q6P6C2 394 aaKnown RBP17.18■□□□□ 0.34
SNCA-209ENST00000506244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
SNCA-209ENST00000506244 SLFN11Q7Z7L1 901 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 C14orf80Q86SX3 495 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 SETD3Q86TU7 594 aaPredicted RBP17.18■□□□□ 0.34
SNCA-209ENST00000506244 CYB5D2Q8WUJ1 264 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 SORCS1Q8WY21 1168 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 TPSD1Q9BZJ3 242 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 ZYG11BQ9C0D3 744 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 RBSNQ9H1K0 784 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 ANLNQ9NQW6 1124 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 PPARGC1AQ9UBK2 798 aaKnown RBP17.18■□□□□ 0.34
SNCA-209ENST00000506244 GMEB2Q9UKD1 530 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 TBC1D30Q9Y2I9 924 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 MYO15AQ9UKN7 3530 aa17.18■□□□□ 0.34
SNCA-209ENST00000506244 TMEM191CA6NGB0 347 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 DRGXA6NNA5 263 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 AKR1B15C9JRZ8 316 aaPredicted RBP17.17■□□□□ 0.34
SNCA-209ENST00000506244 RNF8O76064 485 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 RHOCP08134 193 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 SRPRAP08240 638 aaKnown RBP17.17■□□□□ 0.34
SNCA-209ENST00000506244 NNMTP40261 264 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 MAPK8IP2Q13387 824 aaPredicted RBP17.17■□□□□ 0.34
SNCA-209ENST00000506244 ELF2Q15723 593 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 SLC18A3Q16572 532 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 LAIR1Q6GTX8 287 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 CXorf57Q6NSI4 855 aaKnown RBP17.17■□□□□ 0.34
SNCA-209ENST00000506244 SCYL2Q6P3W7 929 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 ZNF683Q8IZ20 524 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 SUMF1Q8NBK3 374 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 MRFAP1L1Q96HT8 127 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 MUC3BQ9H195 1237 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 TMEM245Q9H330 911 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 MYO1AQ9UBC5 1043 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 OR12D3Q9UGF7 316 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 RAD54BQ9Y620 910 aa17.17■□□□□ 0.34
SNCA-209ENST00000506244 EIF3CLB5ME19 914 aaKnown RBP17.16■□□□□ 0.34
SNCA-209ENST00000506244 HRO43593 1189 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 AKR1B10O60218 316 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 ZNF217O75362 1048 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 GABRG2P18507 467 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 PRKCHP24723 683 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 EIF4A3P38919 411 aaKnown RBP17.16■□□□□ 0.34
SNCA-209ENST00000506244 PLK1P53350 603 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 ECT2LQ008S8 904 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 PTPRNQ16849 979 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 ZNF783Q6ZMS7 281 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 ASCL5Q7RTU5 278 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 ALYREFQ86V81 257 aaKnown RBP17.16■□□□□ 0.34
SNCA-209ENST00000506244 CCDC185Q8N715 623 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 RUBCNQ92622 972 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 TBC1D31Q96DN5 1066 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 EIF3CQ99613 913 aaKnown RBP17.16■□□□□ 0.34
SNCA-209ENST00000506244 EPAS1Q99814 870 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 HINFPQ9BQA5 517 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 C2orf49Q9BVC5 232 aaPredicted RBP17.16■□□□□ 0.34
SNCA-209ENST00000506244 CD248Q9HCU0 757 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 TMPRSS4Q9NRS4 437 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 NCDNQ9UBB6 729 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 SUN2Q9UH99 717 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 SLC25A13Q9UJS0 675 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 VPS28Q9UK41 221 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 INTS6Q9UL03 887 aaKnown RBP17.16■□□□□ 0.34
SNCA-209ENST00000506244 SNX10Q9Y5X0 201 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 CKAP5Q14008 2032 aa17.16■□□□□ 0.34
SNCA-209ENST00000506244 WASH3PC4AMC7 463 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 CNTN5O94779 1100 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms