RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 UAP1L1Q3KQV9 507 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 CT47A1Q5JQC4 288 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 EFHC1Q5JVL4 640 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 CCAR2Q8N163 923 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 CPA5Q8WXQ8 436 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 PRCCQ92733 491 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 ALG14Q96F25 216 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 RPL10LQ96L21 214 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 STK33Q9BYT3 514 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 C6orf106Q9H6K1 298 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 SPEGQ15772 3267 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 FASNP49327 2511 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 M0QYT0 321 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 PAGE1O75459 146 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 TOP3BO95985 862 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 ZNF18P17022 549 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 NOVA1P51513 510 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 METAP1P53582 386 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 POLR2FP61218 127 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 FMO1Q01740 532 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 FOXC1Q12948 553 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 CDH18Q13634 790 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 PLEKHG6Q3KR16 790 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 PHLDB2Q86SQ0 1253 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 ATP6V0D2Q8N8Y2 350 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 PCDHB18PQ96TA0 734 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 TBCBQ99426 244 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 FAM207AQ9NSI2 230 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 ZFYVE26Q68DK2 2539 aa17.28■□□□□ 0.36
PDLIM7-215ENST00000506161 ANKRD11Q6UB99 2663 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 PKD1L2Q7Z442 2459 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 ZZEF1O43149 2961 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 F5H5T6 163 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 H0Y626 953 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 GOLGA8SH3BPF8 625 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 NDUFS2O75306 463 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 CNTN5O94779 1100 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 SERPINF2P08697 491 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 ATP1A3P13637 1013 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 NOS2P35228 1153 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 MATKP42679 507 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 SULT1E1P49888 294 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 AUHQ13825 339 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 SYCP1Q15431 976 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 DUOXA1Q1HG43 343 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 ALFQ53S48 1182 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 DCAF12L1Q5VU92 463 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 NAA35Q5VZE5 725 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 BNIPLQ7Z465 357 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 TMEM35BQ8NCS4 154 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 DEFB124Q8NES8 71 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 C1orf216Q8TAB5 229 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 DNASE2BQ8WZ79 361 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 NT5C3BQ969T7 300 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 ORAI3Q9BRQ5 295 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 NUSAP1Q9BXS6 441 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 MAGEB5Q9BZ81 275 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 LIMA1Q9UHB6 759 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 TMEM59LQ9UK28 342 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 SLC6A14Q9UN76 642 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 PLA2G4CQ9UP65 541 aa17.27■□□□□ 0.36
PDLIM7-215ENST00000506161 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 METTL12A8MUP2 240 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 ZBTB24O43167 697 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 CYP1A1P04798 512 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 ATP5BP06576 529 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 CCR1P32246 355 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 PTP4A2Q12974 167 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 HNRNPA1L2Q32P51 320 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 C9orf64Q5T6V5 341 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 FAM102AQ5T9C2 384 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 SH3PXD2AQ5TCZ1 1133 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 RGL4Q8IZJ4 473 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 ZCCHC9Q8N567 271 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 EMC1Q8N766 993 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 PTPRN2Q92932 1015 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 C18orf8Q96DM3 657 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 FAM129BQ96TA1 746 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 TRIM62Q9BVG3 475 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 TMEM121BQ9BXQ6 578 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 SIK2Q9H0K1 926 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 RSPH9Q9H1X1 276 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 ARHGEF38Q9NXL2 777 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 EIF2B4Q9UI10 523 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 OR51B4Q9Y5P0 310 aa17.26■□□□□ 0.35
PDLIM7-215ENST00000506161 MEI4A8MW99 385 aa17.25■□□□□ 0.35
PDLIM7-215ENST00000506161 GJB3O75712 270 aa17.25■□□□□ 0.35
PDLIM7-215ENST00000506161 SOX5P35711 763 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms